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Series GSE149837 Query DataSets for GSE149837
Status Public on Oct 01, 2020
Title Cut and Run chipseq of Fli1 in CD8 post Cl13 infection
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genetic deletion of Fl1 enhanced CD8 Effector responses
 
Overall design Biological replicates were analyzed for WT and the KO genotypes
 
Contributor(s) Chen Z, Wherry EJ
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 04, 2020
Last update date Oct 01, 2020
Contact name E JOHN WHERRY
Organization name University of Pennsylvania
Department Systems Pharmacology and Translational Therapeutics,Institute for Immunology
Street address 421 Curie Blvd,354 BRB II/III
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (6)
GSM4514049 CnR_Fli1_rep1
GSM4514050 CnR_Fli1_rep2
GSM4514051 CnR_Fli1_rep3
This SubSeries is part of SuperSeries:
GSE149839 Fli1 as transcriptional safeguard that restrains effector CD8 T cell differentiation
Relations
BioProject PRJNA630256
SRA SRP260027

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149837_peak_pool_Cl13_Fli1.final.bed.anno.txt.gz 113.5 Kb (ftp)(http) TXT
GSE149837_peak_pool_Cl13_Fli1.final.bed.gz 19.7 Kb (ftp)(http) BED
GSE149837_pool_Cl13_Fli1.clean.bw 310.4 Mb (ftp)(http) BW
GSE149837_pool_Cl13_Fli1.clean.subtractIgG.bw 407.2 Mb (ftp)(http) BW
GSE149837_pool_IgG.bw 557.2 Mb (ftp)(http) BW
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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