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Series GSE149839 Query DataSets for GSE149839
Status Public on Oct 01, 2020
Title Fli1 as transcriptional safeguard that restrains effector CD8 T cell differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date May 04, 2020
Last update date Oct 03, 2020
Contact name E JOHN WHERRY
Organization name University of Pennsylvania
Department Systems Pharmacology and Translational Therapeutics,Institute for Immunology
Street address 421 Curie Blvd,354 BRB II/III
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (20)
GSM4514043 ATAC-seq_Fli1KO_rep1
GSM4514044 ATAC-seq_Fli1KO_rep2
GSM4514045 ATAC-seq_Fli1KO_rep3
This SuperSeries is composed of the following SubSeries:
GSE149836 Chromatin accessibility changes of Fli1ko vs WT in CD8 T cells
GSE149837 Cut and Run chipseq of Fli1 in CD8 post Cl13 infection
GSE149838 In vivo CRISPR screening identifies Fli1 as transcriptional safeguard that restrains effector CD8 T cell differentiation [RNA-seq]
Relations
BioProject PRJNA630251

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149839_RAW.tar 2.9 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp

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