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Status |
Public on May 27, 2020 |
Title |
Gene expression data from mouse salivary glands (wild type and Nfkbiz-deficient mice) |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
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Summary |
We used microarrays to detail the global program of gene expression underlying identified distinct classes of up-regulated or down-regulated genes in salivary glands between Nfkbiz-/- and wild type mice.
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Overall design |
Total RNA samples obtained from the 20-week-old non-cohoused Nfkbiz+/+ and Nfkbiz-/- mice (n = 2 per group) were subjected to cDNA synthesis and labeling using the GeneChip™ WT PLUS Reagent Kit (ThermoFisher Scientific, Waltham, MA, USA) and then transcriptome analysis using the Affymetrix whole-transcript expression arrays (ThermoFisher Scientific) at Macrogen Inc. (Seoul, Korea).
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Contributor(s) |
Lee J, Choi Y |
Citation(s) |
33127905 |
Submission date |
May 26, 2020 |
Last update date |
Nov 09, 2020 |
Contact name |
Junho Lee |
E-mail(s) |
junholee0516@gmail.com
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Phone |
01056498411
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Organization name |
Asan
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Department |
Pathology
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Lab |
Junho Lee
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Street address |
88, Olympic-ro 43-gil, Songpa-gu, Seoul
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City |
Seoul |
State/province |
Seoul |
ZIP/Postal code |
05505 |
Country |
South Korea |
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Platforms (1) |
GPL23038 |
[Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay) |
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Samples (4)
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GSM4567611 |
salivary gland of Nfkbiz-deficient mouse at week 20, M47 |
GSM4567612 |
salivary gland of Nfkbiz-deficient mouse at week 20, M49 |
GSM4567613 |
salivary gland of wild type mouse at week 20, M30 |
GSM4567614 |
salivary gland of wild type mouse at week 20, M55 |
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Relations |
BioProject |
PRJNA635014 |
Supplementary file |
Size |
Download |
File type/resource |
GSE151163_RAW.tar |
3.9 Mb |
(http)(custom) |
TAR (of CEL) |
GSE151163_data2.xlsx |
7.9 Mb |
(ftp)(http) |
XLSX |
GSE151163_data3.xlsx |
2.6 Mb |
(ftp)(http) |
XLSX |
Processed data included within Sample table |
Processed data are available on Series record |
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