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Series GSE151610 Query DataSets for GSE151610
Status Public on Jun 03, 2020
Title Epithelial membrane protein 2 (EMP2) regulates hypoxia induced angiogenesis in retinal epithelial cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Pathologic retinal neovascularization is a potentially blinding consequence seen in many common diseases including diabetic retinopathy, retinopathy of prematurity, and retinal vascular occlusive diseases, among others. The use of therapeutics targeting pro-angiogenesis factors such as vascular endothelial growth factor (VEGF) has proven to be highly effective, however considerable side effects exist and serial anti-VEGF treatment has been shown to decrease effectiveness over time. Characterization of additional regulators of neovascularization is needed to further understand neovascular disease and identify possible new therapeutic targets. This study investigates epithelial membrane protein 2 (EMP2) and its role as a possible modulator of angiogenesis in human retinal pigment epithelium (RPE) under hypoxia. EMP2 is highly expressed in human RPE and RPE cell lines. Adult retinal pigment epithelial cell line-19 (ARPE-19) cells were genetically modified to either overexpress EMP2 (OE) or knock down EMP2 (KD) and expression at the RNA and protein level was evaluated using RNA sequencing and western blot respectively. Protein expression was evaluated under both normoxic conditions and conditions of hypoxic stress with 0.5% O2. EMP2 expression was found to positively correlate with expression of the pro-angiogenesis factors hypoxia inducible factor 1-alpha (HIF-1a) and VEGF for both RNA and protein. EMP2 mediated changes in ARPE-19 cells was also found to alter the secretion of a paracrine factor(s) in conditioned media that can regulate human umbilical vein endothelial cells (HUVEC) endothelial cell migration and capillary tube formation in in vitro functional angiogenesis assays. This study identifies EMP2 as a potentially important mediator of angiogenesis in the human RPE, a tissue involved in abnormal retinal neovascularization in a number of diseases. EMP2 levels positively correlate with those of the potent pro-angiogenesis mediators HIF-1a and VEGF, however the mechanism of this relationship remains to be clarified. This study supports further investigation of EMP2 as a promising novel target for therapeutic treatment of pathologic neovascularization in the retina.
 
Overall design mRNA profiles of ARPE-19 cell panel consisting of EMP2 knock down, EMP2 overexpressing, vector control, and WT ARPE-19 cells under hypoxic and normoxic conditions
 
Contributor(s) Sun MM, Cherian N, Chan AM, Chu A, Wadehra M, Gordon LK
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 02, 2020
Last update date Jun 03, 2020
Contact name Michel M Sun
Organization name UCLA
Department Ophthalmology
Lab Gordon Lab
Street address 675 Charles E Young Dr S
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (24)
GSM4586567 hypoxia_KD_1
GSM4586568 hypoxia_OE_1
GSM4586569 hypoxia_VC_1
Relations
BioProject PRJNA636612
SRA SRP265560

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151610_Alignment_report.xlsx 11.2 Kb (ftp)(http) XLSX
GSE151610_Gene_counts.xlsx 6.9 Mb (ftp)(http) XLSX
GSE151610_Normalized_Gene_counts.xlsx 11.2 Mb (ftp)(http) XLSX
GSE151610_Project_Report.docx.gz 34.7 Kb (ftp)(http) DOCX
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Raw data are available in SRA
Processed data are available on Series record

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