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Series GSE152869 Query DataSets for GSE152869
Status Public on Apr 22, 2021
Title eATP-responsive synthetic yeast ameliorate TNBS-induced colitis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary By combining directed evolution and synthetic biology, we engineered novel synthetic yeasts probiotics for the dynamic modulation of intestinal inflammation. In this experiment we treated TNBS-colitis induced mice with these probiotics and test the amelioration of immune response in the transcriptional level in the colon.
 
Overall design A colon piece was colected from each mouse at the peak of the diesease for transcriptional analysis. Control groups were included.
 
Contributor(s) Gutierrez-Vazquez C, Li Z, Quintana FJ
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 19, 2020
Last update date Apr 24, 2021
Contact name Zhaorong Li
E-mail(s) zhaorong@bu.edu
Organization name Brigham and Women's Hospital
Street address 60 Fenwood Road
City Boston
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (16)
GSM4628222 Health Control_1
GSM4628223 Health Control_2
GSM4628224 Health Control_3
Relations
BioProject PRJNA640672
SRA SRP268073

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152869_RAW.tar 53.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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