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Series GSE154325 Query DataSets for GSE154325
Status Public on Nov 09, 2020
Title Exon and Gene Level Expression Profiling of Islets in Gaz Knockout Mice on Control and High Fat Diets
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptome analysis of RNA samples from islets
To gain grater insight into the role and mechanisms behind the inhibitory G-Protein, Gaz we used global gene expression profiling. In mice, transgenic loss of B-cell Gaz is protective against high fat diets. through increased insulin secretion. This mechansism is poorly understood and here, using global transcriptomics we attempt to understand the genetic impact of Gaz knockout on control and HFD diets in male mice.
 
Overall design Raw probe cell intesity data was analyzed at both the gene- and exon-level using the Robust Multichip Analysis (RMA) algorithm within the Affymetrix Expression Console 1.3 software package
 
Contributor(s) Green C, Schaid M, Kimple M
Citation(s) 33172888
Submission date Jul 13, 2020
Last update date Feb 10, 2021
Contact name Cara Leanne Green
E-mail(s) cara.green@wisc.edu
Phone 6082363548
Organization name University of Wisconsin-Madisin
Department Medicine
Street address 2214 Kendall Ave
City Madison
State/province Wisconsin
ZIP/Postal code 53726
Country USA
 
Platforms (2)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
GPL6193 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version]
Samples (36)
GSM4668997 Mouse Islet 1 [exon-level]
GSM4668998 Mouse Islet 2 [exon-level]
GSM4668999 Mouse Islet 3 [exon-level]
Relations
BioProject PRJNA645896

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154325_RAW.tar 1.0 Gb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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