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Series GSE156627 Query DataSets for GSE156627
Status Public on Mar 19, 2021
Title Novel indirect co-culture of immortalized hepatocytes with monocyte derived macrophages is supported by pro-inflammatory cytokine networks
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The liver is composed of different cell populations. Interactions of different cell populations can be investigated bya newly established indirect co-culture system consisting of immortalised primary human hepatocytes and human monocyte derived macrophages(MDMs). Using the time-dependent cytokine secretion of the co-cultures and singlecultures, correlation networks(includingthe cytokinesG-CSF, CCL3, MCP-1, CCL20, FGF, TGF-β1, GM-CSF, IL-8 IL-6, IL-1β, and IL-18)were generated and the correlationswere validatedbyapplication of IL-8and TNF-α-neutralising antibodies. Thedata reveal that IL-8 is crucial for the interaction between hepatocytes and macrophages in vitro.In addition, transcriptome analyses showedthat a change in the ratio between macrophages and hepatocytes may triggerpro-inflammatory signalling pathways of the acute phase responseand the complement system(release of, e.g., certaincyto-and chemokines).Using diclofenac and LPS showed that the release of cytokines is increasingwith higher ratios of MDMs. Altogether we coulddemonstratethat the current co-culture system is better suited to mirror thein vivosituation when compared to previously established co-culturesystems composed of HepG2and differentiated THP-1cells.Further, our data reveal that the cytokine IL-8 is crucial for the interaction between hepatocytes and macrophages in vitro.
 
Overall design Characterization of Fa2N-4 cells under influence of monocyte derived macrophages using the Affymetrix Human Clariom S. Array data was processed by the company ATLAS Biolabs GmbH (Friedrichstraße 147, 10117 Berlin, Germany). Three biological replicates were performed for each condition.
Web link https://0-www-sciencedirect-com.brum.beds.ac.uk/science/article/pii/S088723332100059X?via%3Dihub
 
Contributor(s) Padberg F, Höper T, Henkel S, Driesch D, Luch A, Zellmer S
Citation(s) 33662514
Submission date Aug 21, 2020
Last update date Mar 21, 2021
Contact name Florian Padberg
Organization name German Federal Institute for Risk Assessment (BfR)
Department Chemicals and Product Safety
Street address Max-Dohrn-Strasse 8-10
City Berlin
ZIP/Postal code 10589
Country Germany
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (18)
GSM4735282 CC 50% Fa2N-4 (24 h) , S1
GSM4735283 CC 15% Fa2N-4 (24 h), S2
GSM4735284 SC Fa2N-4 (24 h), S3
Relations
BioProject PRJNA658539

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156627_RAW.tar 23.4 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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