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Status |
Public on Aug 27, 2020 |
Title |
TRAP-Seq uncovers post-transcriptional gene regulation after acute sleep deprivation |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
To identify the effects of sleep deprivation on the translatome, we took advantage of the RiboTag mouse line with an HA labeled ribosomal protein to express labeled Rpl22 in CaMKIIa neurons to selectively isolate and then sequence mRNA transcripts associated with ribosomes
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Overall design |
Ribosome associated mRNA from hippocampus of 2-3 months male mice.
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Citation(s) |
33272296 |
BioProject |
PRJNA659422 |
Submission date |
Aug 26, 2020 |
Last update date |
Dec 08, 2020 |
Contact name |
Yann Vanrobaeys |
E-mail(s) |
yann-vanrobaeys@uiowa.edu
|
Phone |
5059139210
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Organization name |
University of Iowa
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Department |
Neuroscience
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Lab |
Ted Abel
|
Street address |
2312 PBDB, 169 Newton Road
|
City |
Iowa City |
State/province |
IA |
ZIP/Postal code |
52242 |
Country |
USA |
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Platforms (1) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (11)
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Relations |
SRA |
SRP278796 |