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GEO accession:
Series GSE157413
Query DataSets for GSE157413
Status
Public on Sep 04, 2020
Title
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
32934023
Submission date
Sep 03, 2020
Last update date
Dec 04, 2020
Contact name
Neel Shah
E-mail(s)
neel_shah@dfci.harvard.edu
Organization name
Dana-Farber Cancer Institute
Street address
450 Brookline Ave
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platforms (2)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (70)
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More...
GSM4764301
Wildtype H3K27ac ChIP
GSM4764302
Pten -/- clone 1 H3K27ac ChIP
GSM4764303
Pten -/- clone 2 H3K27ac ChIP
GSM4764304
Pten -/- R26-ERG clone 1 H3K27ac ChIP
GSM4764305
Pten -/- R26-ERG clone 2 H3K27ac ChIP
GSM4764306
Pten -/- R26-ERG ERG CRISPR clone 1 H3K27ac ChIP
GSM4764307
Pten -/- R26-ERG ERG CRISPR clone 2 H3K27ac ChIP
GSM4764308
Pten -/- R26-ERG non-targeting CRISPR H3K27ac ChIP
GSM4764309
Wildtype 1 AR ChIP
GSM4764310
Wildtype 2 AR ChIP
GSM4764311
Pten -/- clone 1 AR ChIP
GSM4764312
Pten -/- clone 2 AR ChIP
GSM4764313
Pten -/- R26-ERG clone 1 AR ChIP
GSM4764314
Pten -/- R26-ERG clone 2 AR ChIP
GSM4764315
Pten -/- R26-ERG ERG CRISPR clone 1 AR ChIP
GSM4764316
Pten -/- R26-ERG ERG CRISPR clone 2 AR ChIP
GSM4764317
Pten -/- R26-ERG non-targeting CRISPR AR ChIP
GSM4764318
Wildtype ERG ChIP
GSM4764319
Pten -/- clone 1 ERG ChIP
GSM4764320
Pten -/- clone 2 ERG ChIP
GSM4764321
Pten -/- R26-ERG clone 1 ERG ChIP
GSM4764322
Pten -/- R26-ERG clone 2 ERG ChIP
GSM4764323
Pten -/- R26-ERG ERG CRISPR clone 1 ERG ChIP
GSM4764324
Pten -/- R26-ERG ERG CRISPR clone 2 ERG ChIP
GSM4764325
Pten -/- R26-ERG non-targeting CRISPR ERG ChIP
GSM4764326
Wildtype_1 PolII ChIP
GSM4764327
Wildtype_2 PolII ChIP
GSM4764328
Pten -/- clone 1 PolII ChIP
GSM4764329
Pten -/- clone 2 PolII ChIP
GSM4764330
Pten -/- R26-ERG clone 1 PolII ChIP
GSM4764331
Pten -/- R26-ERG clone 2 PolII ChIP
GSM4764332
Pten -/- R26-ERG ERG CRISPR clone 1 PolII ChIP
GSM4764333
Pten -/- R26-ERG ERG CRISPR clone 2 PolII ChIP
GSM4764334
Pten -/- R26-ERG non-targeting CRISPR PolII ChIP
GSM4764335
Wildtype ATAC 1
GSM4764336
Wildtype ATAC 2
GSM4764337
Pten -/- clone 1 ATAC 1
GSM4764338
Pten -/- clone 1 ATAC 2
GSM4764339
Pten -/- clone 2 ATAC 1
GSM4764340
Pten -/- clone 2 ATAC 2
GSM4764341
Pten -/- R26-ERG clone 1 ATAC 1
GSM4764342
Pten -/- R26-ERG clone 1 ATAC 2
GSM4764343
Pten -/- R26-ERG clone 2 ATAC 1
GSM4764344
Pten -/- R26-ERG clone 2 ATAC 2
GSM4764345
Pten -/- R26-ERG ERG CRISPR clone 1 ATAC 1
GSM4764346
Pten -/- R26-ERG ERG CRISPR clone 1 ATAC 2
GSM4764347
Pten -/- R26-ERG ERG CRISPR clone 2 ATAC 1
GSM4764348
Pten -/- R26-ERG ERG CRISPR clone 2 ATAC 2
GSM4764349
Pten -/- R26-ERG non-targeting CRISPR ATAC 1
GSM4764350
Pten -/- R26-ERG non-targeting CRISPR ATAC 2
GSM4764351
Wildtype RNA 1
GSM4764352
Wildtype RNA 2
GSM4764353
Pten -/- clone 1 RNA 1
GSM4764354
Pten -/- clone 1 RNA 2
GSM4764355
Pten -/- clone 2 RNA 1
GSM4764356
Pten -/- clone 2 RNA 2
GSM4764357
Pten -/- R26-ERG clone 1 RNA 1
GSM4764358
Pten -/- R26-ERG clone 1 RNA 2
GSM4764359
Pten -/- R26-ERG clone 2 RNA 1
GSM4764360
Pten -/- R26-ERG clone 2 RNA 2
GSM4764361
Pten -/- R26-ERG ERG CRISPR clone 1 RNA 1
GSM4764362
Pten -/- R26-ERG ERG CRISPR clone 1 RNA 2
GSM4764363
Pten -/- R26-ERG ERG CRISPR clone 2 RNA 1
GSM4764364
Pten -/- R26-ERG ERG CRISPR clone 2 RNA 2
GSM4764365
Pten -/- R26-ERG non-targeting CRISPR RNA 1
GSM4764366
Pten -/- R26-ERG non-targeting CRISPR RNA 2
GSM4764367
Wildtype scRNA
GSM4764368
Pten -/- scRNA
GSM4764369
Pten -/- R26-ERG scRNA
GSM4764370
Pten -/- R26-ERG ERG CRISPR scRNA
This SuperSeries is composed of the following SubSeries:
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More...
GSE157404
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [H3K27ac ChIP]
GSE157405
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [AR ChIP]
GSE157406
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [ERG ChIP]
GSE157407
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [PolII ChIP]
GSE157408
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [ATAC]
GSE157409
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [Bulk RNA-seq]
GSE157410
ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [single cell RNA-seq]
Relations
BioProject
PRJNA661225
Download family
Format
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Supplementary file
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Download
File type/resource
GSE157413_RAW.tar
10.4 Gb
(http)
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TAR (of BW)
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