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Series GSE157981 Query DataSets for GSE157981
Status Public on Jun 14, 2021
Title NFAT signalling in human mesenchymal stromal cells affects extracellular matrix metabolism and anti-fungal immune responses
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Mesenchymal stromal cells (MSCs) combined with calcineurin-NFAT (CN-NFAT) inhibitors are being tested as a treatment for graft versus host disease (GvHD). The immunosuppressive properties of MSCs seem beneficial; however, their response during fungal infection, which is an important cause of mortality in GvHD patients, is unknown. We report that MSCs phagocytose the fungal component zymosan, resulting in phosphorylation of Syk kinase, increase in cytosolic calcium levels and ultimately, in NFAT1 nuclear translocation. RNA-sequencing analysis of zymosan-treated MSCs showed that CN-NFAT inhibition affects extracellular matrix (ECM) genes, but not cytokine expression that is under the control of the NF-κB pathway. When co-culturing MSCs or decellularized MSC-ECM with human peripheral blood mononuclear cells (PBMCs), selective NFAT inhibition in MSCs decreased cytokine expression by PBMCs. These findings reveal a dual mechanism underlying the MSC response to zymosan: while NF-κB directly controls inflammatory cytokine expression, NFAT impacts immune-cell functions by regulating ECM remodelling.
 
Overall design mRNA transcriptome of human adipose derived mesenchymal stromal cells (AT-MSCs) treated with zymosan in presence or absence of CN-NFAT inhibitor FK506
Web link https://0-doi-org.brum.beds.ac.uk/10.1016/j.isci.2021.102683
 
Contributor(s) Tidu F, De Zuani M, Jose SS, Bendickova K, Kubala L, Caruso F, Cavalieri F, Forte G, Fric J
Citation(s) 34195564
Submission date Sep 15, 2020
Last update date Sep 13, 2021
Contact name Marco De Zuani
Organization name FNUSA - ICRC
Department CTM
Lab CMI
Street address Pekarska, 53
City Brno
ZIP/Postal code 65691
Country Czech Republic
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (9)
GSM4783531 MSC_1_NT
GSM4783532 MSC_2_NT
GSM4783533 MSC_3_NT
Relations
BioProject PRJNA663579
SRA SRP282462

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Supplementary file Size Download File type/resource
GSE157981_RAW.tar 1.7 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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