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Series GSE158279 Query DataSets for GSE158279
Status Public on May 18, 2021
Title Genome-wide distribution of AR, Sp1, H3K27Ac, H3K4me1 in E16.5 embryonic external genitalia (eExG)
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analysis of AR, Sp1, H3K27Ac, and H3K4me1; The genime-wide distribution of AR, Sp1, H3K27Ac, and H3K4me1 druing murine embryonic external genitalia (eExG) sex differentiation was shown.
 
Overall design 20-30 eExG were collected for ChIP-seq. Each ChIP analysis was performed in 2 independent biological replicates (Sp1 for the single analysis).
Web link https://0-doi-org.brum.beds.ac.uk/10.1073/pnas.2024067118
 
Contributor(s) Kajioka D, Sato T, Matsushita S, Suzuki K, Yamada G
Citation(s) 34074765, 36465133
Submission date Sep 21, 2020
Last update date Dec 16, 2022
Contact name Gen Yamada
E-mail(s) genyama778899@gmail.com
Organization name Wakayama Medical University
Department Institute of Advanced Medicine
Lab Department of Developmental Genetics
Street address 811–1 Kimiidera
City Wakayama
ZIP/Postal code 641–8509
Country Japan
 
Platforms (2)
GPL18635 Ion Torrent Proton (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (20)
GSM4796306 Sample 1_male_input for AR_1st
GSM4796307 Sample 2_male AR_1st
GSM4796308 Sample 3_male input for AR_2nd
Relations
BioProject PRJNA664741
SRA SRP284236

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158279_RAW.tar 13.2 Mb (http)(custom) TAR (of BED, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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