NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE158298 Query DataSets for GSE158298
Status Public on Oct 24, 2020
Title Identification of required host factors for SARS-CoV-2 infection in human cells
Organism Homo sapiens
Experiment type Other
Summary We performed a genome-wide CRISPR knockout screen to identify human genes required for SARS-CoV-2 infection.
 
Overall design Human A549-ACE2 CRISPR-Cas9 perturbed cells were infected with SARS-CoV-2 at two MOIs (0.01 and 0.3), and cells were collected for genomic DNA isolation 6 days post-infection.
Web link https://0-doi-org.brum.beds.ac.uk/10.1016/j.cell.2020.10.030
 
Contributor(s) Daniloski Z, Jordan TX, tenOever BR, Sanjana NE
Citation(s) 33147445, 33880488
Submission date Sep 21, 2020
Last update date May 27, 2021
Contact name Zharko Daniloski
E-mail(s) zd315@nyu.edu
Organization name New York University
Department Biology
Street address 1 Washington square village, 2P
City New York City
State/province New York
ZIP/Postal code 10012
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (4)
GSM4796722 GeCKOv2 plasmid library
GSM4796723 CRISPR screen pre-infection
GSM4796724 CRISPR screen SARS-CoV-2 MOI 0.01
Relations
Reanalyzed by GSE175666
BioProject PRJNA664769
SRA SRP284267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158298_RAW.tar 3.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap