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Series GSE159349 Query DataSets for GSE159349
Status Public on Oct 28, 2021
Title Human monocyte-derived macrophages polarized by GM-CSF in the presence or absence of 50 nanomolar Pemetrexed
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Macrophage phenotypic and functional heterogeneity derives from tissue-specific transcriptional signatures shaped by the local microenvironment. GM-CSF drives the generation of human monocyte-derived macrophages with a potent pro-inflammatory activity upon stimulation. One-carbon metabolism (OCM) is a complex network of biosynthetic pathways that includes de novo biosynthesis of purines and thymidylate, amino acid metabolism, and methylation reactions. We explored the molecular impact of blocking OCM with the anti-folate pemetrexed (PMX) on the gene expression profile in GM-CSF-primed human monocyte derived macrophages.
 
Overall design mRNA profiles of human macrophages differentiated with GM-CSF (GM-MØ) from peripheral blood monocytes in the absence or in the presence of the antifolate pemetrexed (PMX).
 
Contributor(s) Romero SF, Campos RG, Kröger AP
Citation(s) 34804067
Submission date Oct 10, 2020
Last update date Nov 30, 2021
Contact name Amaya Rocío Puig Kröger
E-mail(s) amaya.puig@iisgm.com
Phone +34 914269268
Organization name Hospital General Universitario Gregorio Marañón
Department Immunology
Lab Immunometabolism and Infammation
Street address Dr. Esquerdo 46
City Madrid
State/province Madrid
ZIP/Postal code 28007
Country Spain
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (6)
GSM4827059 GM-MØ macrophage donor1 rep1
GSM4827060 GM-MØ macrophage donor2 rep2
GSM4827061 GM-MØ macrophage donor3 rep3
Relations
BioProject PRJNA668525
SRA SRP286985

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159349_RAW.tar 400.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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