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Series GSE161074 Query DataSets for GSE161074
Status Public on Nov 25, 2021
Title Neuronal development in NEIL3-deficient mice (hippocampus)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary brain tissue from all subregions (CA1, CA3, dentate gyrus) of the hippocampal formation was isolated at postnatal day 8 and at an adult age (3-6months old animals) in wildtype and NEIL3-deficient mice (n=4 at p8 and n=3 at adult age). NEILs are DNA glycosylases potentially involved in transcription regulation and hippocampal neuronal maturation. RNA was extracted and sequenced.
 
Overall design Wildtype (C57Bl6) and mice deficient in NEIL3 (C57Bl6-background) were used. Tissue was isolated exclusively at baseline, i.e. the animal was taken directly from its homecage without any behavioral intervention
 
Contributor(s) Kunath N, Obermann T, Bugaj A, Fernandez MS, Bjørås M, Ye J
Citation(s) 34988395
Submission date Nov 09, 2020
Last update date Oct 02, 2023
Contact name Jing Ye
E-mail(s) jing.ye@ntnu.no
Organization name Norwegian University of Science and Technology (NTNU)
Department Department of Clinical and Molecular Medicine (IKOM)
Street address Høgskoleringen 1
City Trondheim
ZIP/Postal code 7030
Country Norway
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (42)
GSM4889246 N3P81_CA1
GSM4889247 N3P81_CA3
GSM4889248 N3P81_DG
This SuperSeries is composed of the following SubSeries:
GSE175358 Neuronal development in NEIL3-deficient mice (hippocampus) [CA1]
GSE175359 Neuronal development in NEIL3-deficient mice (hippocampus) [CA3]
GSE175360 neuronal development in NEIL3-deficient mice (hippocampus) [DG]
Relations
BioProject PRJNA675494
SRA SRP291697

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Supplementary file Size Download File type/resource
GSE161074_fpkm_42_samples_development.xlsx 6.2 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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