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Series GSE161424 Query DataSets for GSE161424
Status Public on Feb 10, 2021
Title Temporally Distinct Myeloid Cell Reponses Mediate Damage and Repair After Cerebrovascular Injury.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Cerebrovascular injuries can cause severe edema and inflammation that adversely affect human health. Here, we observed recanalization after successful endovascular thrombectomy for acute large vessel occlusion was associated with cerebral edema and poor clinical outcomes in patients who experienced hemorrhagic transformation. To understand this process, we developed a cerebrovascular injury model using transcranial ultrasound that enabled spatiotemporal evaluation of resident and peripheral myeloid cells. We discovered that injurious and reparative responses diverged based on time and cellular origin. Resident microglia initially stabilized damaged vessels in a purinergic receptor-dependent manner, which was followed by influx of myelomonocytic cells that caused severe edema. Prolonged blockade of myeloid cell recruitment with anti-adhesion molecule therapy prevented severe edema but also promoted neuronal destruction and fibrosis by interfering with vascular repair later orchestrated by pro-inflammatory monocytes and pro-angiogenic repair-associated microglia (RAM). These data demonstrate how temporally distinct myeloid cell responses can contain, exacerbate, and ultimately repair a cerebrovascular injury.
 
Overall design Bulk RNA-Seq profiling of twelve different B6 mice (4 uninjured, 4 injured, 4 injured with αLFA1/VLA4).
 
Contributor(s) Mastorakos P, Mihelson N, Luby M, Burks SR, Johnson KR, Hsia AW, Witko J, Frank JA, Latour L, McGavern DB
Citation(s) 33462481
Submission date Nov 13, 2020
Last update date Feb 10, 2021
Contact name Kory R Johnson
E-mail(s) johnsonko@ninds.nih.gov
Phone 301-402-1956
Organization name NINDS/NIH
Department DIR IT & Bioinformatics
Lab Bioinformatics Section
Street address 10/3B01, 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (12)
GSM4906845 uninjured_rep1
GSM4906846 uninjured_rep2
GSM4906847 uninjured_rep3
Relations
BioProject PRJNA678288
SRA SRP292496

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161424_RAW.tar 16.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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