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| Status |
Public on Jul 07, 2021 |
| Title |
Chickpea shows genotype-specific nodulation responses across soil nitrogen environment and root disease resistance categories |
| Organism |
Cicer arietinum |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The ability of chickpea to obtain sufficient nitrogen via its symbiotic relationship with Mesorhizobium ciceri is of critical importance in supporting growth and grain production. A number of factors can affect this symbiotic relationship including abiotic conditions, plant genotype, and disruptions to host signalling/perception networks. In order to support improved nodule formation in chickpea, we investigated how plant genotype and soil nutrient availability affect chickpea nodule formation and nitrogen fixation. Further, using transcriptomic profiling, we sought to identify gene expression patterns that characterize highly nodulated genotypes.
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| |
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| Overall design |
RNA-sequencing of six chickpea genotypes three days post-inoculation with Mesorhizobium ciceri or a mock inoculated control
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| |
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| Contributor(s) |
Plett KL, Bithell SL, Dando A, Plett JM |
| Citation(s) |
34210277 |
| Submission date |
Nov 30, 2020 |
| Last update date |
Jul 07, 2021 |
| Contact name |
Krista Plett |
| E-mail(s) |
k.plett@westernsydney.edu.au
|
| Organization name |
Western Sydney University
|
| Department |
Hawkesbury Institute for the Environment
|
| Street address |
Locked Bag 1797
|
| City |
Penrith |
| State/province |
NSW |
| ZIP/Postal code |
2751 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL29457 |
Illumina NovaSeq 6000 (Cicer arietinum) |
|
| Samples (36)
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| Relations |
| BioProject |
PRJNA681512 |
| SRA |
SRP295092 |
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