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Series GSE163814 Query DataSets for GSE163814
Status Public on May 03, 2021
Title Identification of differentially expressed miRNAs after overexpression of UBE2CP3 in gastric cancer
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary In this study, we used miRNA sequencing to analyze and identify possible miRNAs that can be regulated by and UBE2CP3 in gastric cancer. The results showed that lncRNA UBE2CP3 overexpression decreased the expression of miR-138-5p. Due to miR-138-5p was able to target ITGA2 expression, and UBE2CP3 knockdown significantly downregulates ITGA2 expression, we speculated UBE2CP3 may positively regulate ITGA2 expression through sponging miR-138-5p in GC.
 
Overall design To reveal the possible target miRNAs of UBE2CP3 in gastric cancer, we overexpressed the expression of UBE2CP3 in SGC7901 cells. The potent differential expressed microRNAs after overexpressing UBE2CP3 were identified by microRNA sequencing.
 
Contributor(s) Qin S, Li D
Citation(s) 34274947
Submission date Dec 24, 2020
Last update date Jul 20, 2021
Contact name Qin Shanshan
E-mail(s) qinss77@163.com
Organization name Institute of Basic Medical Sciences, School of Basic Medical Sciences, Hubei University of Medicine
Street address Renmin Road 30, Maojian District
City Shiyan
ZIP/Postal code 442000
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (4)
GSM4987880 SGC7901_oeNC_rep1
GSM4987881 SGC7901_oeNC_rep2
GSM4987882 SGC7901_oeUBE2CP3_rep1
Relations
BioProject PRJNA687673
SRA SRP299257

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163814_MiRNA.count.tpm.txt.gz 43.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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