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Series GSE16441 Query DataSets for GSE16441
Status Public on Feb 28, 2011
Title Identifying mRNA targets of microRNA in clear cell renal cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Non-coding RNA profiling by array
Summary A bioinformatic approach to identify targets of microRNA in cancer.

Keywords: Patient sample study
 
Overall design Samples GSM413237-GSM413270: Total RNA from 17 RCC tumors and 17 corresponding non-tumor samples was hybridized against a common reference RNA (Perou CM, Sorlie T, Eisen MB, et al. Molecular portraits of human breast tumours. Nature 2000;406:747-752) for gene expression analysis.

Samples GSM413271-GSM413304: MicroRNA from 17 RCC tumors and 17 corresponding non-tumor samples were hybridized on a single channel platform for miRNA expression analysis.
 
Contributor(s) Liu H, Brannon AR, Reddy A, Alexe G, Seiler M, Arreola A, Oza J, Yao M, Juan D, Liou L, Ganesan S, Rathmell WK, Bhanot G
Citation(s) 20420713, 26941587
Submission date Jun 04, 2009
Last update date Oct 07, 2019
Contact name Kimryn Rathmell
E-mail(s) kimryn.rathmell@vanderbilt.edu
Organization name Vanderbilt
Department Medicine
Lab Rathmell
Street address 2220 Pierce Ave
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (2)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
GPL8659 Agilent Human miRNA Microarray Rel12.0
Samples (68)
GSM413237 Renal_Cell_Carcinoma_3
GSM413238 Renal_Cell_Carcinoma_6
GSM413239 Renal_Cell_Carcinoma_21
Relations
BioProject PRJNA116271

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16441_RAW.tar 542.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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