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Series GSE164574 Query DataSets for GSE164574
Status Public on Apr 11, 2021
Title Smad4 controls signaling robustness and morphogenesis by differentially contributing to the Nodal and BMP pathways
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this scRNA-seq study was to characterize the pseudo-spatial distribution of Nodal and BMP effectors (SMADs) expression prior to the onset of gastrulation
 
Overall design scRNA-seq was performed on Zebrafish embryos at sphere stage
 
Contributor(s) Guglielmi L, East P, Hill CS
Citation(s) 34737283
Submission date Jan 11, 2021
Last update date Dec 02, 2021
Contact name Philip East
E-mail(s) philip.east@crick.ac.uk
Phone 2037961843
Organization name The Francis Crick Institute
Department Bioinformatics
Lab Bioinformatics
Street address 1 Midland Road, London
City London
State/province London
ZIP/Postal code NW1 1AT
Country United Kingdom
 
Platforms (1)
GPL21741 Illumina HiSeq 4000 (Danio rerio)
Samples (1)
GSM5014336 Zsphere-scRNA
Relations
BioProject PRJNA691237
SRA SRP301260

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164574_RAW.tar 29.1 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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