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Series GSE167327 Query DataSets for GSE167327
Status Public on Mar 24, 2021
Title scRNAseq of CD45 enriched cells from spinal cords of Optn floxed and KO mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We prepared spinal cords from Optn floxed and KO mice treated with vehicle or the RIPK1 inhibitor Nec-1s, which were enriched for CD45+ cells and single cell RNA sequenced using the inDrop protocol.
 
Overall design inDrop single cell RNA sequencing
 
Contributor(s) Mifflin L, Zou C, Yuan J
Citation(s) 33766915
Submission date Feb 23, 2021
Last update date Jun 23, 2021
Contact name Lauren Mifflin
E-mail(s) lauren_mifflin@hms.harvard.edu
Organization name Harvard Medical School
Department Department of Cell Biology
Lab Yuan Lab
Street address 260 Longwood Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (1)
GSM5101954 Optn
This SubSeries is part of SuperSeries:
GSE167332 scRNAseq from spinal cords
Relations
BioProject PRJNA704318
SRA SRP307720

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE167327.txt.gz 440 b (ftp)(http) TXT
GSE167327_RAW.tar 5.0 Mb (http)(custom) TAR (of MTX, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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