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Series GSE167331 Query DataSets for GSE167331
Status Public on Mar 24, 2021
Title scRNAseq of FACS-isolated microglia from spinal cords of Optn KO mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary CD11b+ CX3CR1+ CD45-Int microglia were FACSorted from Optn KO mice and single cell RNA sequenced using the SmartSeq2 protocol.
 
Overall design SmartSeq2 single cell RNA sequencing
 
Contributor(s) Mifflin L, Zou C, Yuan J
Citation(s) 33766915
Submission date Feb 23, 2021
Last update date Jun 23, 2021
Contact name Lauren Mifflin
E-mail(s) lauren_mifflin@hms.harvard.edu
Organization name Harvard Medical School
Department Department of Cell Biology
Lab Yuan Lab
Street address 260 Longwood Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (384)
GSM5102043 111617p1_A10_S10
GSM5102044 111617p1_A11_S11
GSM5102045 111617p1_A12_S12
This SubSeries is part of SuperSeries:
GSE167332 scRNAseq from spinal cords
Relations
BioProject PRJNA704326
SRA SRP307728

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE167331_nextseq_180111_rsem.genes.tpm.matrix.gz 2.7 Mb (ftp)(http) MATRIX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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