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Series GSE168803 Query DataSets for GSE168803
Status Public on Mar 23, 2021
Title Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36331876
Submission date Mar 12, 2021
Last update date Nov 09, 2022
Contact name Jun Kim
E-mail(s) kimj50@nyu.edu
Phone 7183094777
Organization name NYU
Department Biology
Lab Ercan
Street address 100 Washington Square East 1009 Silver Center
City New York
State/province NY
ZIP/Postal code 10003
Country USA
 
Platforms (4)
GPL13657 Illumina HiSeq 2000 (Caenorhabditis elegans)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
GPL19757 Illumina NextSeq 500 (Caenorhabditis elegans)
Samples (150)
GSM5170239 COP325_emb_RNA_rep1
GSM5170240 COP325_emb_RNA_rep2
GSM5170241 COP325_emb_RNA_rep3
This SuperSeries is composed of the following SubSeries:
GSE168802 Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (RNA-seq)
GSE169250 Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (ChIP-seq)
GSE169468 Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (Hi-C)
Relations
BioProject PRJNA714064

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168803_RAW.tar 8.2 Gb (http)(custom) TAR (of BEDGRAPH, BW, HIC, TXT)
SRA Run SelectorHelp
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