|
| Status |
Public on Feb 04, 2022 |
| Title |
Microbiome mediated plasticity promotes thermal adaptation in Nematostella vectensis |
| Organism |
Nematostella vectensis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We wanted to infer the contribution of host vs symbiotic microbiota plasticities on thermal acclimation of the holobiont. We long-term acclimated anymals of the same clonal line to 3 different temperatures (15, 20 and 25°C) and monitored along time the changes in fitness, microbiota composition, and host transcriptome.
|
| |
|
| Overall design |
we submitted 15 samples of acclimated female polyps representing 5 replicates from each treatment temperature (15, 20, 25°C).
|
| |
|
| Contributor(s) |
Baldassarre L, Ying H, Reitzel A, Fraune S |
| Citation(s) |
35084499 |
| Submission date |
Mar 15, 2021 |
| Last update date |
Mar 03, 2022 |
| Contact name |
Sebastian Fraune |
| E-mail(s) |
fraune@hhu.de
|
| Phone |
49 211 81 14991
|
| Organization name |
Heinrich-Heine-University
|
| Department |
Institute for Zoology and Organismic Interactions
|
| Lab |
AG Fraune
|
| Street address |
Universitätsstr. 1, Building: 26.24, Floor/Room: 02.114
|
| City |
Düsseldorf |
| State/province |
North Rhine-Westphalia |
| ZIP/Postal code |
40225 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL29855 |
Illumina HiSeq 4000 (Nematostella vectensis) |
|
| Samples (15)
|
|
| Relations |
| BioProject |
PRJNA714634 |
| SRA |
SRP310688 |
Less...
More...