NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE169429 Query DataSets for GSE169429
Status Public on Jan 01, 2022
Title Gene expression profiles from the cardiac tissue of HIPK2-knockout and Wild Type (WT) mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary We use Affymetrix Gene Chip Array to screen the targets of HIPK2 in heart. Total RNA was extracted from 8-week-old HIPK2-knockout and Wild Type (WT) mice.
 
Overall design C57BL/6 HIPK2-/- mice were generated in Beijing Viewsolid Bioteh Co. Ltd (Beijing, China) by embryo injection of CRISPRs targeting the second exon (guide RNA sequences: AAGTTCCAACTGGGACATGACTGGGT) of the mouse Hipk2 gene. Frameshift mutations (56bp deletion: TGGGTACGGCTCCCACAGCAAAGTGTACAGCCAGAGCAAGAACATACCACCTTCTC) were identified and crossed with C57BL/6 WT mice for colony expansion and subsequent experiments. Tail biopsies of HIPK2-/- mice were analyzed by genomic PCR (forward primer 5’- TTCAGAGTGGAAGAACAATC -3’ and reverse primer 5’- TTGGTAGGTGTCAAGGAG -3’).
 
Contributor(s) Zhou Q, Xiao J
Citation(s) 36182775
Submission date Mar 23, 2021
Last update date Oct 06, 2022
Contact name Qiulian Zhou
E-mail(s) qlzhou1992@i.shu.edu.cn
Organization name Shanghai University
Department Institute of Cardiovascular Sciences
Lab Cardiac Regeneration and Ageing Lab
Street address Nanchen Road
City Shanghai
ZIP/Postal code 200444
Country China
 
Platforms (1)
GPL21163 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray [Probe Name version]
Samples (10)
GSM5202996 HIPK2_knockout_rep1
GSM5202997 HIPK2_knockout_rep2
GSM5202998 HIPK2_knockout_rep3
Relations
BioProject PRJNA716600

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE169429_RAW.tar 135.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap