|
| Status |
Public on Jan 11, 2022 |
| Title |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Bat3-/- BMDC Transcriptomes II |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare NGS-derived retinal transcriptome profiling (RNA-seq) to microarray and quantitative reverse transcription polymerase chain reaction (qRT–PCR) methods and to evaluate protocols for optimal high-throughput data analysis
|
| |
|
| Overall design |
BMDC mRNA profiles of wild type (WT) and Bat3-/- mice
|
| |
|
| Citation(s) |
35275752 |
| Submission date |
Mar 24, 2021 |
| Last update date |
Apr 13, 2022 |
| Contact name |
Ayshwarya Subramanian |
| E-mail(s) |
subraman@broadinstitute.org
|
| Organization name |
Broad Institute
|
| Department |
Klarman Cell Observatory
|
| Street address |
415 Main Street
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
|
| Samples (45)
|
|
| This SubSeries is part of SuperSeries: |
| GSE169664 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Bat3-/- BMDC Transcriptomes |
|
| Relations |
| BioProject |
PRJNA716996 |
| SRA |
SRP311986 |
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