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Series GSE16967 Query DataSets for GSE16967
Status Public on Jul 01, 2010
Title Expression data from ERK1/2 null endothelial cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Angiogenesis is a complex process orchestrated by both growth factors and cell adhesion to the extracellular matrix and is initiated by focal degradation of the vascular basement membrane with subsequent migration and proliferation of endothelial cells (EC). The Ras/Raf/MEK/ERK pathway is critical for EC function during angiogensis. Although in vitro studies implicate ERK1 and ERK2 in EC survival, their precise role in EC function in vivo remains poorly defined. Cre/loxP technology was used to inactivate Erk1 and Erk2 in EC during murine development, resulting in embryonic lethality due to a drastic reduction in angiogenesis. The angiogenic defect was linked to diminished EC proliferation and migration, but not to increased cell apoptosis. Expression of key cell cycle regulators was diminished in the double knockout cells. In addition, both Paxillin and Focal Adhesion Kinase were expressed at lower levels and failed to correctly localize to the cell membrane in EC lacking Erk1 and Erk2, leading to defects in the organization of the cytoskeleton and in cell motility. The results demonstrate that ERK1 and ERK2 coordinate cell proliferation and migration during angiogenesis.
 
Overall design Lentivirus infected cells to generate ERK1/2 WT and ERK1/2 DKO endothelial cells were cultured, RNA was extracted and Affymetrix gene expression arrays were performed.
 
Contributor(s) Srinivasan R, Ostrowski MC
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Submission date Jul 06, 2009
Last update date Mar 06, 2018
Contact name Ruchika Srinivasan
E-mail(s) ruchika.srinivasan@osumc.edu
Phone 614-688-3825
Fax 614-688-4181
Organization name The Ohio State University
Street address Rm 840 W12th avenue
City Columbus
State/province OH
ZIP/Postal code 43201
Country USA
 
Platforms (1)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM424812 ERK1/2 null EC, biological rep1
GSM424813 ERK1/2 null EC, biological rep2
GSM424814 ERK1/2 null EC, biological rep3
Relations
BioProject PRJNA117255

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16967_RAW.tar 130.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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