NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE170980 Query DataSets for GSE170980
Status Public on Mar 30, 2021
Title TF ChIP-seq from HepG2 (ENCSR690FIA)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-Seq on HepG2

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR690FIA/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Mar 27, 2021
Last update date May 06, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM5215765 TF ChIP-seq from HepG2 (ENCLB208RBI)
GSM5215766 TF ChIP-seq from HepG2 (ENCLB528NSB)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE170980_ENCFF040AQZ_fold_change_over_control_GRCh38.bigWig 872.0 Mb (ftp)(http) BIGWIG
GSE170980_ENCFF203CGN_conservative_IDR_thresholded_peaks_GRCh38.bigBed 392.7 Kb (ftp)(http) BIGBED
GSE170980_ENCFF347CCA_IDR_thresholded_peaks_GRCh38.bigBed 471.8 Kb (ftp)(http) BIGBED
GSE170980_ENCFF405LDS_IDR_thresholded_peaks_GRCh38.bed.gz 225.4 Kb (ftp)(http) BED
GSE170980_ENCFF481KFX_conservative_IDR_thresholded_peaks_GRCh38.bed.gz 175.8 Kb (ftp)(http) BED
GSE170980_ENCFF638LRB_signal_p-value_GRCh38.bigWig 943.4 Mb (ftp)(http) BIGWIG
GSE170980_ENCFF814JMH_IDR_ranked_peaks_GRCh38.bed.gz 7.5 Mb (ftp)(http) BED
GSE170980_ENCFF869HNJ_IDR_ranked_peaks_GRCh38.bed.gz 6.2 Mb (ftp)(http) BED
GSE170980_RAW.tar 2.0 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap