NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE171273 Query DataSets for GSE171273
Status Public on Jun 14, 2021
Title Innate and adaptive immunity cross-talk reprograms the tumor microenvironment to an inflammatory hub able to eliminate established poorly immunogenic tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Clinical benefit remains elusive for most patients with poorly inflamed carcinomas treated with immune checkpoint blockade. Alternative therapies able to convert the tumor microenvironment (TME) into a functionally inflamed immune hub may increase clinical benefit. Using comprehensive TME single-cell transcriptome, proteome, and immune cell analysis, we demonstrated that entinostat, a class I HDAC inhibitor, facilitates tumor deposition of the necrosis-targeted immunocytokine NHS-IL12 to promote potent anti-tumor efficacy against established MC38 and CT26 colon carcinoma models, with complete eradication of poorly immunogenic EMT6 breast tumors. Combination therapy reprogrammed the tumor innate and adaptive immunome to an inflamed landscape, where the concerted action of highly functional CD8+ T cells and activated neutrophils drove a dramatic macrophage M1-like polarization leading to complete tumor eradication. A biomarker signature of the mechanism involved in these studies is associated with patients’ overall survival in multiple tumor types. Collectively, these findings provide a rationale for combining NHS-IL12 with entinostat in the clinical setting.
 
Overall design Single-cell RNAseq of immune cells in the tumor microenvironment enabled the identification of main immune subsets contributing to innate and adaptive cross-talk
 
Contributor(s) Chariou P, Gameiro S, Hicks K, Cam M, Meyer TJ, Bian J, Schlom J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 31, 2021
Last update date Jun 16, 2021
Contact name Thomas Joshua Meyer
E-mail(s) thomas.meyer@nih.gov
Organization name National Institutes of Health
Department National Cancer Institute
Lab CCBR
Street address 41 Center Drive, Building 41, Room B620
City Bethesda
State/province Maryland
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (5)
GSM5221634 SCAF1713_1_1
GSM5221636 SCAF1714_2_1
GSM5221638 SCAF1715_3_1
Relations
BioProject PRJNA718881
SRA SRP312953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171273_RAW.tar 42.5 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap