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Series GSE171499 Query DataSets for GSE171499
Status Public on Jun 21, 2021
Title An integrated epigenome and transcriptome analysis to clarify the effect of epigenetic inhibitors in gastrointestinal stromal cells
Organism Homo sapiens
Experiment type Expression profiling by array
Methylation profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34083271
Submission date Apr 05, 2021
Last update date Jun 21, 2021
Contact name Hiromu Suzuki
E-mail(s) hsuzuki@sapmed.ac.jp
Phone +81-11-611-2111
Organization name Sapporo Medical University
Department Department of Molecular Biology
Street address S1, W17, Chuo-ku
City Sapporo
State/province Hokkaido
ZIP/Postal code 060-8556
Country Japan
 
Platforms (3)
GPL13393 AB SOLiD 4 System (Homo sapiens)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL16699 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
Samples (10)
GSM5226343 GIST-T1 replicate1
GSM5226344 GIST-T1 replicate2
GSM5226345 GIST-T1 Aza replicate1
This SuperSeries is composed of the following SubSeries:
GSE171495 An integrated epigenome and transcriptome analysis to clarify the effect of epigenetic inhibitors in gastrointestinal stromal cells (Expression)
GSE171496 An integrated epigenome and transcriptome analysis to clarify the effect of epigenetic inhibitors in gastrointestinal stromal cells (Methylation)
GSE171498 An integrated epigenome and transcriptome analysis to clarify the effect of epigenetic inhibitors in gastrointestinal stromal cells (ChIP-Seq)
Relations
BioProject PRJNA719808

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171499_RAW.tar 266.6 Mb (http)(custom) TAR (of IDAT, TXT)
SRA Run SelectorHelp

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