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Series GSE172102 Query DataSets for GSE172102
Status Public on Jul 27, 2021
Title Antimicrobial immunity impedes CNS vascular repair following brain injury
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Traumatic brain injuries (TBI) and cerebrovascular injuries are leading causes of disability and mortality worldwide. Systemic infections often accompany these disorders, which can impede recovery and significantly worsen outcomes. Remodeling of the central nervous system (CNS) after injury is essential for functional recovery and depends on temporally and spatially coordinated innate immune responses; however, the effect of systemic infections on this process is not well understood. Here, we demonstrate that a broad range of systemically introduced microbes and pathogen-associated molecular patterns interfered with immune-mediated meningeal vascular repair after TBI, with sequential infections promoting a prolonged state of disrepair. Mechanistically, we discovered that MDA5-dependent detection of a noncytopathic arenavirus encountered after TBI disrupted pro-angiogenic programming in recruited myeloid cells via local induction of type I interferon signaling. Systemic viral infection similarly promoted type I interferon-dependent impairment of restorative angiogenesis in the brain parenchyma after intracranial hemorrhage, leading to chronic blood brain barrier leakage, sustained interferon signaling, and a failure to restore cognitive-motor function. Our findings reveal an immunological mechanism by which systemic infections deviate reparative programming after CNS injury and offer a new therapeutic target to improve recovery and prevent states of prolonged neurological decline.
 
Overall design Bulk RNA-Seq profiling of the cerebral cortex from twelve different mice in total; including four uninjured mice (Ctrl), four naïve cerebrovascular injured mice (CVI) at day 20 post-injury relative to uninjured mice, and four cerebrovascular injured mice at day 20 post-injury relative to uninjured mice infected with lymphocytic choriomeningitis virus (CVI LCMV).
 
Contributor(s) Mastorakos P, Russo MV, Zhou T, Johnson KR, McGavern DB
Citation(s) 34556874
Submission date Apr 14, 2021
Last update date Oct 26, 2021
Contact name Kory R Johnson
E-mail(s) johnsonko@ninds.nih.gov
Phone 301-402-1956
Organization name NINDS/NIH
Department DIR IT & Bioinformatics
Lab Bioinformatics Section
Street address 10/3B01, 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (12)
GSM5241831 Cerebral Cortex_Ctrl_Rep1
GSM5241832 Cerebral Cortex_Ctrl_Rep2
GSM5241833 Cerebral Cortex_Ctrl_Rep3
Relations
BioProject PRJNA722016
SRA SRP314865

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172102_RAW.tar 24.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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