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Series GSE172449 Query DataSets for GSE172449
Status Public on Oct 12, 2021
Title Comparative gene expression in adult SVZ-neurospheres differentiated under standard conditions and upon manipulations of Pax6 (OE) and/or Pbx1 (KD/OE)
Organism Mus musculus
Experiment type Expression profiling by array
Summary We used microarrays to detail the global programme of gene expression underlying neuronal differentiation of SVZ-neurospheres when manipulating Pax6 expression in the presence or absence of Pbx1
 
Overall design Freshly isolated stem- and progenitor cells from the SVZ of adult mice were subjected to four treatment regimes: i) infection with pCLIG, GFP-expressing retroviral vector viruses (vector ctrl), ii) infection with pCLIG expressing Pbx1 (Pbx1 OE), iii) transfection with non-targeting siRNAs followed by infection with pCLIG expressing Pax6 (Pax6 OE) and iv) transfection with siRNAs targeting Pbx1 followed by infection with pCLIG expressing Pax6 (Pax6 OE / Pbx1 KD). 48 hours later, the cells were differentiated for 10 hours on laminin-coated dishes by removal of EGF and FGF2 from the culture medium.
 
Contributor(s) Hau A, Schulte D
Citation(s) 34697387
Submission date Apr 20, 2021
Last update date Nov 03, 2021
Contact name Ann-Christin Hau
E-mail(s) ann-christin.hau@lns.etat.lu
Organization name Laboratoire National de sante
Department National Center of Pathology
Street address 1, Rue Louis Rech
City Luxembourg
ZIP/Postal code 3555
Country Luxembourg
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM5256691 Pbx1 Knockdown_48h_diff_Rep1
GSM5256692 Neurogenic Ctrl_48h_diff_Rep1
GSM5256693 Pbx1 Overexpression_48h_diff_Rep1
Relations
BioProject PRJNA723324

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Supplementary file Size Download File type/resource
GSE172449_RAW.tar 32.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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