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GEO accession:
Series GSE173082
Query DataSets for GSE173082
Status
Public on Apr 23, 2021
Title
Differential DNA methylation & mRNA expression in gingival tissues in periodontal health and disease
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Apr 22, 2021
Last update date
Apr 25, 2021
Contact name
Shannon McKinney-Freeman
E-mail(s)
smckinne@stjude.org
Organization name
St. Jude Children's Research Hospital
Department
Hematology
Street address
262 Danny Thomas Place
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21145
Infinium MethylationEPIC
Samples (72)
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More...
GSM5259431
AC001_Periodontitis (RNA-seq)
GSM5259432
AC003_Periodontitis (RNA-seq)
GSM5259433
AC005_Periodontitis (RNA-seq)
GSM5259434
AC007_Periodontitis (RNA-seq)
GSM5259435
AC009_Periodontitis (RNA-seq)
GSM5259436
AC011_Periodontitis (RNA-seq)
GSM5259437
AC013_Healthy (RNA-seq)
GSM5259438
AC016_Healthy (RNA-seq)
GSM5259439
AC018_Healthy (RNA-seq)
GSM5259440
AC019_Healthy (RNA-seq)
GSM5259441
AC022_Healthy (RNA-seq)
GSM5259442
AC024_Healthy (RNA-seq)
GSM5259443
AC026_Gingivitis (RNA-seq)
GSM5259444
AC028_Gingivitis (RNA-seq)
GSM5259445
AC030_Gingivitis (RNA-seq)
GSM5259446
AC032_Gingivitis (RNA-seq)
GSM5259447
AC034_Gingivitis (RNA-seq)
GSM5259448
AC035_Gingivitis (RNA-seq)
GSM5259449
AC037_Periodontitis (RNA-seq)
GSM5259450
AC039_Periodontitis (RNA-seq)
GSM5259451
AC042_Periodontitis (RNA-seq)
GSM5259452
AC044_Periodontitis (RNA-seq)
GSM5259453
AC046_Periodontitis (RNA-seq)
GSM5259454
AC048_Periodontitis (RNA-seq)
GSM5259455
AC050_Healthy (RNA-seq)
GSM5259456
AC052_Healthy (RNA-seq)
GSM5259457
AC054_Healthy (RNA-seq)
GSM5259458
AC056_Healthy (RNA-seq)
GSM5259459
AC058_Healthy (RNA-seq)
GSM5259460
AC060_Healthy (RNA-seq)
GSM5259461
AC062_Gingivitis (RNA-seq)
GSM5259462
AC064_Gingivitis (RNA-seq)
GSM5259463
AC066_Gingivitis (RNA-seq)
GSM5259464
AC068_Gingivitis (RNA-seq)
GSM5259465
AC070_Gingivitis (RNA-seq)
GSM5259466
AC072_Gingivitis (RNA-seq)
GSM5259483
AC001_Periodontitis (array)
GSM5259484
AC003_Periodontitis (array)
GSM5259485
AC005_Periodontitis (array)
GSM5259486
AC007_Periodontitis (array)
GSM5259487
AC009_Periodontitis (array)
GSM5259488
AC011_Periodontitis (array)
GSM5259489
AC013_Healthy (array)
GSM5259490
AC016_Healthy (array)
GSM5259491
AC018_Healthy (array)
GSM5259492
AC019_Healthy (array)
GSM5259493
AC022_Healthy (array)
GSM5259494
AC024_Healthy (array)
GSM5259495
AC026_Gingivitis (array)
GSM5259496
AC028_Gingivitis (array)
GSM5259497
AC030_Gingivitis (array)
GSM5259498
AC032_Gingivitis (array)
GSM5259499
AC034_Gingivitis (array)
GSM5259500
AC035_Gingivitis (array)
GSM5259501
AC037_Periodontitis (array)
GSM5259502
AC039_Periodontitis (array)
GSM5259503
AC042_Periodontitis (array)
GSM5259504
AC044_Periodontitis (array)
GSM5259505
AC046_Periodontitis (array)
GSM5259506
AC048_Periodontitis (array)
GSM5259507
AC050_Healthy (array)
GSM5259508
AC052_Healthy (array)
GSM5259509
AC054_Healthy (array)
GSM5259510
AC056_Healthy (array)
GSM5259511
AC058_Healthy (array)
GSM5259512
AC060_Healthy (array)
GSM5259513
AC062_Gingivitis (array)
GSM5259514
AC064_Gingivitis (array)
GSM5259515
AC066_Gingivitis (array)
GSM5259516
AC068_Gingivitis (array)
GSM5259517
AC070_Gingivitis (array)
GSM5259518
AC072_Gingivitis (array)
This SuperSeries is composed of the following SubSeries:
GSE173078
Differential mRNA transcription in gingival tissues in periodontal health and disease [RNA-seq]
GSE173081
Differential DNA methylation in gingival tissues in periodontal health and disease [Array]
Relations
BioProject
PRJNA723759
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE173082_RAW.tar
1.0 Gb
(http)
(custom)
TAR (of IDAT, TXT)
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