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Series GSE173082 Query DataSets for GSE173082
Status Public on Apr 23, 2021
Title Differential DNA methylation & mRNA expression in gingival tissues in periodontal health and disease
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Apr 22, 2021
Last update date Apr 25, 2021
Contact name Shannon McKinney-Freeman
E-mail(s) smckinne@stjude.org
Organization name St. Jude Children's Research Hospital
Department Hematology
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (2)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL21145 Infinium MethylationEPIC
Samples (72)
GSM5259431 AC001_Periodontitis (RNA-seq)
GSM5259432 AC003_Periodontitis (RNA-seq)
GSM5259433 AC005_Periodontitis (RNA-seq)
This SuperSeries is composed of the following SubSeries:
GSE173078 Differential mRNA transcription in gingival tissues in periodontal health and disease [RNA-seq]
GSE173081 Differential DNA methylation in gingival tissues in periodontal health and disease [Array]
Relations
BioProject PRJNA723759

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173082_RAW.tar 1.0 Gb (http)(custom) TAR (of IDAT, TXT)
SRA Run SelectorHelp

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