NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE174578 Query DataSets for GSE174578
Status Public on May 18, 2021
Title SPAG9-JAK2 gene expression array in Ba/F3 cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary SPAG9-JAK2 is a novel fusion gene identified in a pediatric patient with Philadelphia chromosome-like acute lymphoblastic leukemia (Ph-like ALL). In this study, we performed functional analysis of the SPAG9-JAK2 fusion to establish molecular targeted therapy. Ba/F3 cells expressing SPAG9-JAK2 generated by retroviral transduction (Ba/F3-SPAG9-JAK2), proliferated in the absence of IL-3, and exhibited constitutive phosphorylation of the tyrosine residues in the JAK2 kinase domain of the fusion protein and STAT3/STAT5. Mutation of tyrosine residues in the JAK2 kinase domain (SPAG9-JAK2 mut) abolished IL-3 independence, but had no influence on STAT3/STAT5 phosphorylation levels. Gene expression analysis revealed that Stat1 was significantly up-regulated in Ba/F3-SPAG9-JAK2 cells. STAT1 was also phosphorylated in Ba/F3-SPAG9-JAK2 but not SPAG9-JAK2 mut cells, suggesting that STAT1 is key for SPAG9-JAK2-mediated cell proliferation. Consistently, STAT1 induced expression of the anti-apoptotic proteins, BCL-2 and MCL-1, as did SPAG9-JAK2, but not SPAG9-JAK2 mut. Ruxolitinib abrogated Ba/F3-SPAG9-JAK2-mediated proliferation in vitro, but was insufficient in vivo. Venetoclax (a BCL-2 inhibitor) or AZD5991 (an MCL-1 inhibitor) enhanced the effects of ruxolitinib on Ba/F3-SPAG9-JAK2 in vitro. These findings suggest that activation of the JAK2-STAT1-BCL-2/MCL-1 axis contributes to SPAG9-JAK2-related aberrant growth promotion. BCL-2 or MCL-1 inhibition is a potential therapeutic option for B-ALL with SPAG9-JAK2 fusion.
 
Overall design Ba/F3 cells were transduced with SPAG9-JAK2 fusion protein by the Retro-X Tet-On Advanced Inducible Expression System (Takara Bio), and Ba/F3 cells expressing SPAG9-JAK2 under doxycycline (DOX) dependent manner were established. To reveal which genes or pathways were affected by SPAG9-JAK2, Ba/F3 cells expressing SPAG9-JAK2 induced by DOX (Ba/F3-SPAG9-JAK2) or uninduced Ba/F3 cells (mock Ba/F3) were cultured in triplicate, and total RNA was extracted from Ba/F3-SPAG9-JAK2 or mock Ba/F3 48 hours later.
 
Contributor(s) Mayumi A, Tomii T, Kanayama T, Mikami T, Tanaka K, Yoshida Y, Kato I, Kawamura M, Nakahata T, Takita J, Hosoi H, Imamura T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 17, 2021
Last update date Mar 29, 2022
Contact name Azusa Mayumi
Organization name Kyoto Prefectural University of Medicine
Department Pediatrics
Street address 465, Kajii-cho, Kawaramachi-Hirokoji, Kamigyo-ku
City Kyoto
ZIP/Postal code 602-8566
Country Japan
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (6)
GSM5320048 Ba/F3, SPAG9-JAK2(+), rep1
GSM5320049 Ba/F3, SPAG9-JAK2(+), rep2
GSM5320050 Ba/F3, SPAG9-JAK2(+), rep3
Relations
BioProject PRJNA730570

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174578_RAW.tar 22.5 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap