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Series GSE175360 Query DataSets for GSE175360
Status Public on Nov 25, 2021
Title neuronal development in NEIL3-deficient mice (hippocampus) [DG]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary brain tissue from Dentate Gyrus subregion of the hippocampal formation was isolated at postnatal day 8 and at an adult age (3-6months old animals) in wildtype and NEIL3-deficient mice (n=4 at p8 and n=3 at adult age). NEILs are DNA glycosylases potentially involved in transcription regulation and hippocampal neuronal maturation. RNA was extracted and sequenced.
 
Overall design Wildtype (C57Bl6) and mice deficient in NEIL3 (C57Bl6-background) were used. Tissue was isolated exclusively at baseline, i.e. the animal was taken directly from its homecage without any behavioral intervention
 
Contributor(s) Kunath N, Obermann T, Bugaj A, Fernandez MS, Bjørås M, Ye J
Citation(s) 34988395
Submission date May 22, 2021
Last update date Oct 02, 2023
Contact name Jing Ye
E-mail(s) jing.ye@ntnu.no
Organization name Norwegian University of Science and Technology (NTNU)
Department Department of Clinical and Molecular Medicine (IKOM)
Street address Høgskoleringen 1
City Trondheim
ZIP/Postal code 7030
Country Norway
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (14)
GSM4889248 N3P81_DG
GSM4889251 N3P82_DG
GSM4889254 N3P83_DG
This SubSeries is part of SuperSeries:
GSE161074 Neuronal development in NEIL3-deficient mice (hippocampus)
Relations
BioProject PRJNA732773
SRA SRP321447

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided
Raw data are available in SRA
Processed data are available on Series record

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