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Series GSE17657 Query DataSets for GSE17657
Status Public on Mar 01, 2010
Title Experiment 4: Affymetrix validation array
Organism Danio rerio
Experiment type Expression profiling by array
Summary Zebrafish embryo were analyzed at 30 and 60 % epiboly for changes in transcriptome of wild-type and MTspg mutant embryos
The Data are used as an independent experimental validation of data obtained for the same stages by Agilent arrays in the main experiments (especially Exp. 1)
Overall design Experiments were performed in biological duplicate. Genedata Expressionist Analyst was used for comparison betwen MZspg and WT gene expression levels at each stage
Contributor(s) Onichtchouk D, Driever W
Citation(s) 20212526, 21621531
Submission date Aug 14, 2009
Last update date Jan 25, 2018
Contact name Wolfgang Driever
Phone 00497612032587
Fax 00497612032597
Organization name University of Freiburg
Street address Hauptstrasse 1
City Freiburg
ZIP/Postal code 79104
Country Germany
Platforms (1)
GPL1319 [Zebrafish] Affymetrix Zebrafish Genome Array
Samples (8)
GSM440846 WT 30% epiboly stage replicate1
GSM440847 WT 30% epiboly stage replicate2
GSM440848 MZspg 30% epiboly stage replicate1
This SubSeries is part of SuperSeries:
GSE17667 Pou5f1 transcription targets in zebrafish
BioProject PRJNA123377

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17657_RAW.tar 15.1 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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