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Series GSE177041 Query DataSets for GSE177041
Status Public on Jun 12, 2021
Title RNA-sequencing explores the transcriptional profile of Wild Type and Fabp3-null mice under physiologicl and cardiac hypertrophic conditions
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background: Cardiac hypertrophy was accompanied by various cardiovascular diseases (CVDs), due to the high global incidence and mortality of CVDs, it has become increasingly critical to characterize the pathogenesis of cardiac hypertrophy. We aimed to determine the metabolic effects of fatty acid binding protein 3 (FABP3), on transverse aortic constriction (TAC)-induced cardiac hypertrophy. Methods and Results: TAC or Ang II treatment markedly upregulated Fabp3 expression. Notably, Fabp3 ablation aggravated TAC-induced cardiac hypertrophy and cardiac dysfunction. Multi-omics analysis revealed that Fabp3-deficient hearts exhibited disrupted metabolic signatures characterized by increased glycolysis, toxic lipid accumulation, and compromised fatty acid oxidation and ATP production under hypertrophic stimuli. Mechanistically, FABP3 mediated metabolic reprogramming by directly interacting with PPARĪ±, which prevented its degradation and synergistically modulated its transcriptional activity on Mlycd, Gck. Finally, treatment with the PPARĪ± agonist, fenofibrate, rescued the pro-hypertrophic effects of Fabp3 deficiency.
 
Overall design Cardiac mRNA from sham or transverse aortic constriction (TAC)-operated WT and Fabp3-null mice were collected for RNA-sequencing analysis, and three independent biological replicates were included in this study.
 
Contributor(s) Zhuang L, Liu Z, Li C, Jin Q, Lu L, Tao R, Yan X, Chen K
Citation(s) 34458345
Submission date Jun 11, 2021
Last update date Aug 31, 2021
Contact name Lingfang Zhuang
E-mail(s) zhuanglingfang@sjtu.edu.cn
Phone 18817288728
Organization name Ruijin Hospital, Shanghai Jiao Tong University School of Medicine
Department Department of Vascular & Cardiology
Lab Department of Vascular & Cardiology
Street address 197 Rui Jin Road II
City Shanghai
State/province Shanghai
ZIP/Postal code 200025
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (12)
GSM5372562 WT sham rep1
GSM5372563 WT sham rep2
GSM5372564 WT sham rep3
Relations
BioProject PRJNA736943
SRA SRP323718

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE177041_RAW.tar 2.7 Mb (http)(custom) TAR (of TXT)
GSE177041_Raw_gene_counts_matrix.txt.gz 687.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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