GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE179065
Query DataSets for GSE179065
Status
Public on Dec 21, 2021
Title
Chiffon triggers global histone H3 acetylation and expression of developmental genes in Drosophila embryos
Organism
Drosophila melanogaster
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34908116
Submission date
Jun 28, 2021
Last update date
Dec 23, 2021
Contact name
Vikki Marie Weake
E-mail(s)
vweake@purdue.edu
Organization name
Purdue University
Department
Biochemistry
Lab
Weake
Street address
175 South University Street
City
West Lafayette
State/province
IN
ZIP/Postal code
47901
Country
USA
Platforms (2)
GPL19951
Illumina HiSeq 1500 (Drosophila melanogaster)
GPL25244
Illumina NovaSeq 6000 (Drosophila melanogaster)
Samples (57)
Less...
More...
GSM5404734
Embryo stage 12-14 ada2b null_rep1
GSM5404735
Embryo stage 12-14 ada2b null_rep2
GSM5404736
Embryo stage 12-14 ada2b null_rep3
GSM5404737
Embryo stage 12-14 ada2b null_rep4
GSM5404738
Embryo stage 12-14 Ada2b-PA_rep1
GSM5404739
Embryo stage 12-14 Ada2b-PA_rep2
GSM5404740
Embryo stage 12-14 Ada2b-PA_rep3
GSM5404741
Embryo stage 12-14 Ada2b-PA_rep4
GSM5404742
Embryo stage 12-14 Ada2b-PB_rep1
GSM5404743
Embryo stage 12-14 Ada2b-PB_rep2
GSM5404744
Embryo stage 12-14 Ada2b-PB_rep3
GSM5404745
Embryo stage 12-14 Ada2b-PB_rep4
GSM5404746
Embryo stage 12-14 Ada2b-PA + Ada2b_PB_rep1
GSM5404747
Embryo stage 12-14 Ada2b-PA + Ada2b_PB_rep2
GSM5404748
Embryo stage 12-14 Ada2b-PA + Ada2b_PB_rep3
GSM5404749
Embryo stage 12-14 Ada2b-PA + Ada2b_PB_rep4
GSM5404750
Embryo stage 12-14 WT_rep1
GSM5404751
Embryo stage 12-14 WT_rep2
GSM5404752
Embryo stage 12-14 WT_rep3
GSM5404753
Embryo stage 12-14 WT_rep4
GSM5404754
Embryo stage 12-14 chiffon null_rep1
GSM5404755
Embryo stage 12-14 chiffon null_rep2
GSM5404756
Embryo stage 12-14 chiffon null_rep3
GSM5404757
Embryo stage 12-14 chiffon null_rep4
GSM5404758
Embryo stage 12-14 chiffon FL_rep1
GSM5404759
Embryo stage 12-14 chiffon FL_rep2
GSM5404760
Embryo stage 12-14 chiffon FL_rep3
GSM5404761
Embryo stage 12-14 chiffon FLWF24_rep1
GSM5404762
Embryo stage 12-14 chiffon FLWF24_rep2
GSM5404763
Embryo stage 12-14 chiffon FLWF24_rep3
GSM5404764
Embryo stage 12-14 chiffon FLWF24_rep4
GSM5404765
Embryo stage 12-14 chiffon ΔN_rep1
GSM5404766
Embryo stage 12-14 chiffon ΔN_rep2
GSM5404767
Embryo stage 12-14 chiffon ΔN_rep3
GSM5404768
Embryo stage 12-14 chiffon ΔN_rep4
GSM5404769
Embryo stage 12-14 WT_for_chiffon_rep1
GSM5404770
Embryo stage 12-14 WT_for_chiffon_rep2
GSM5404771
Embryo stage 12-14 WT_for_chiffon_rep3
GSM5404772
Embryo stage 12-14 WT_for_chiffon_rep4
GSM5404773
Embryo stage 12-14 chiffon null_rep1 INPUT
GSM5404774
Embryo stage 12-14 chiffon null_rep2 INPUT
GSM5404775
Embryo stage 12-14 chiffon null_rep3 INPUT
GSM5404776
Embryo stage 12-14 chiffon FL_rep1 INPUT
GSM5404777
Embryo stage 12-14 chiffon FL_rep2 INPUT
GSM5404778
Embryo stage 12-14 chiffon FL_rep3 INPUT
GSM5404779
Embryo stage 12-14 chiffon null_rep1 H3
GSM5404780
Embryo stage 12-14 chiffon null_rep2 H3
GSM5404781
Embryo stage 12-14 chiffon null_rep3 H3
GSM5404782
Embryo stage 12-14 chiffon FL_rep1 H3
GSM5404783
Embryo stage 12-14 chiffon FL_rep2 H3
GSM5404784
Embryo stage 12-14 chiffon FL_rep3 H3
GSM5404785
Embryo stage 12-14 chiffon null_rep1 H3k14ac
GSM5404786
Embryo stage 12-14 chiffon null_rep2 H3k14ac
GSM5404787
Embryo stage 12-14 chiffon null_rep3 H3k14ac
GSM5404788
Embryo stage 12-14 chiffon FL_rep1 H3k14ac
GSM5404789
Embryo stage 12-14 chiffon FL_rep2 H3k14ac
GSM5404790
Embryo stage 12-14 chiffon FL_rep3 H3k14ac
This SuperSeries is composed of the following SubSeries:
GSE179060
Chiffon triggers global histone H3 acetylation and expression of developmental genes in Drosophila embryos [ada2b]
GSE179061
iChiffon triggers global histone H3 acetylation and expression of developmental genes in Drosophila embryos [chiffon]
GSE179062
Chiffon triggers global histone H3 acetylation and expression of developmental genes in Drosophila embryos [ChIP-seq]
Relations
BioProject
PRJNA742034
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE179065_RAW.tar
980.0 Mb
(http)
(custom)
TAR (of BW)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|