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Series GSE179249 Query DataSets for GSE179249
Status Public on Sep 01, 2021
Title Single cell RNA sequencing of healthy donor human CAR-T cells and adjacent tumor tissue from NSG mice bearing ASPC-1 tumors that are treated with CAR-T cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to assess the consequences of RN7SL1 production on CAR-T cell gene expression cells within the ASCP-1 tumor microenvironment. RN7SL1 RNA-producing CAR-T cells are the relevant experimental condition, while control M5BBz CAR-T cells are also collected.
 
Overall design Single-cell mRNA profiles. 10X 3' v3.1 chemistry utilized.
 
Contributor(s) Minn AJ, Johnson LR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 01, 2021
Last update date Sep 03, 2021
Contact name Lexus Johnson
E-mail(s) lexusj@mail.med.upenn.edu
Phone 3154816542
Organization name University of Pennsylvania
Department Radiation Oncology
Lab Minn
Street address 421 Curie Blvd, 532
City Philadelphia
State/province Pennsylvania
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (4)
GSM5412146 M5BBz_7SL_1
GSM5412147 M5BBz_7SL_2
GSM5412148 M5BBz_1
Relations
BioProject PRJNA742924
SRA SRP326464

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179249_RAW.tar 13.3 Mb (http)(custom) TAR (of H5, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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