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Series GSE179777 Query DataSets for GSE179777
Status Public on Jul 09, 2021
Title Small intestinal tissue and epithelial regeneration after 12 Gy whole-body irradiation of C57BL/6 wild type mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary C57BL/6 wild type mice were exposed to 12 Gy whole-body irradiation. Before irradiation (t=0) and at t=24, 48 and 96 hours after irradiation, mice (n=10 per time point) were euthanized. From n=5 mice per time point RNA was isolated from small-intestinal (jejunum) tissue, from n=5 mice per time point RNA was isolated from EDTA-isolated epithelial cells from small-intestinal tissue (jejunum).
 
Overall design n=40 in total: n=5 small intestinal tissue per time point, n=5 EDTA-isolated small intestinal epithelial cells per time point. Time points t=0h, 24h, 48h, 96h
 
Contributor(s) van der Meer JH, Meisner S, Muncan V
Citation(s) 34599156
Submission date Jul 08, 2021
Last update date Oct 13, 2021
Contact name Sander Meisner
E-mail(s) s.meisner@amsterdamumc.nl
Phone 0031205668158
Organization name AMC
Department Tytgat institute
Lab DIGEST
Street address Meibergdreef 69-71
City Amsterdam
State/province NH
ZIP/Postal code 1105BK
Country Netherlands
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (40)
GSM5433946 Small_intestine_control_0h_rep1
GSM5433947 Small_intestine_control_0h_rep2
GSM5433948 Small_intestine_control_0h_rep3
Relations
BioProject PRJNA744934

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179777_RAW.tar 50.2 Mb (http)(custom) TAR (of IDAT)
GSE179777_non-normalized.txt.gz 5.5 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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