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Series GSE180887 Query DataSets for GSE180887
Status Public on Jul 29, 2021
Title Next-generation sequencing analysis of molecular subtypes of gastric cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Increasing evidence has clarified that the tumor microenvironment (TME) is closely related to the prognosis and therapeutic efficacy of gastric cancer (GC). However, there is no reliable TME evaluation system used to accurately predict the prognosis and therapeutic efficacy of gastric cancer. In this study, immune cell enrichment analysis was used to construct an immune microenvironment score (IMS).We further demonstrated that IMS may be used as an indicator to predict the efficacy of immunotherapy in patients with GC.
 
Overall design 30 fresh tissue samples for gastric cancer
 
Contributor(s) Shen Z, Lin Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 27, 2021
Last update date Jul 29, 2021
Contact name Yilin Lin
E-mail(s) linyilin0430@fjmu.edu.cn
Organization name peking university
Street address 38 Xueyuan Road
City Beijing
ZIP/Postal code 100000
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (30)
GSM5474342 A1
GSM5474343 A5
GSM5474344 A6
Relations
BioProject PRJNA749940
SRA SRP330001

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180887_Raw_gene_counts_matrix.txt.gz 4.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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