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Status |
Public on May 04, 2022 |
Title |
Genome-wide DNA methylation proifling reveals candidate biomarkers and probable molecular mechanisms in metabolic syndrome [RNA-seq] |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
The goals of this study are to investigate the molecular mechanism and biomarker by DNA methylation profiles in patients with metabolic syndrome compared to normal.
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Overall design |
In this study, we performed Infinium MethylationEPIC BeadChIP and RNA-seq with same patients to explore a molecular targets for the prediction of metabolic syndrome. A total of 20 participants, including 11 patietns with metabolic syndrome and 9 normal were enrolled in our study.
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Contributor(s) |
Jin HJ, Baek S, Lee S |
Citation(s) |
35496480 |
Submission date |
Aug 07, 2021 |
Last update date |
May 04, 2022 |
Contact name |
Su-Jin Baek |
Organization name |
KOREA INSTITUTE of ORIENTAL MEDICINE
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Street address |
1672, Yuseong-daero
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City |
Daejeon |
ZIP/Postal code |
34054 |
Country |
South Korea |
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Platforms (1) |
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Samples (20)
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GSM5508788 |
Metabolic_syndrome (KC1-G36-H0833), total RNA |
GSM5508789 |
Metabolic_syndrome (KC1-G36-H0113), total RNA |
GSM5508790 |
Metabolic_syndrome (KC1-G36-H1870), total RNA |
GSM5508791 |
control (KC1-G36-H1740), total RNA |
GSM5508792 |
Metabolic_syndrome (KC1-G36-H2002), total RNA |
GSM5508793 |
control (KC1-G36-H1242), total RNA |
GSM5508794 |
control (KC1-G36-H0907), total RNA |
GSM5508795 |
Metabolic_syndrome (KC1-G36-H1873), total RNA |
GSM5508796 |
control (KC1-G36-H0613), total RNA |
GSM5508797 |
Metabolic_syndrome (KC1-G36-H0915), total RNA |
GSM5508798 |
Metabolic_syndrome (KC1-G36-H1080), total RNA |
GSM5508799 |
control (KC1-G36-H1099), total RNA |
GSM5508800 |
Metabolic_syndrome (KC1-G36-H0623), total RNA |
GSM5508801 |
control (KC1-G36-H1176), total RNA |
GSM5508802 |
Metabolic_syndrome (KC1-G36-H1614), total RNA |
GSM5508803 |
control (KC1-G36-H0826), total RNA |
GSM5508804 |
control (KC1-G36-H1806), total RNA |
GSM5508805 |
control (KC1-G36-H1549), total RNA |
GSM5508806 |
Metabolic_syndrome (KC1-G36-H0844), total RNA |
GSM5508807 |
Metabolic_syndrome (KC1-G36-H1297), total RNA |
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This SubSeries is part of SuperSeries: |
GSE181647 |
Genome-wide DNA methylation proifling reveals candidate biomarkers and probable molecular mechanisms in metabolic syndrome |
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Relations |
BioProject |
PRJNA752799 |
SRA |
SRP331476 |
Supplementary file |
Size |
Download |
File type/resource |
GSE181646_Expression_matrix.txt.gz |
653.7 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
Raw data are available in SRA |
Processed data are available on Series record |
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