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Series GSE182925 Query DataSets for GSE182925
Status Public on Aug 29, 2021
Title microRNA profile of control vehicle- and coagulation protease factor VIIa-released endothelial extracellular vesicles
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Coagulation protease factor VIIa (FVIIa) is shown to induce anti-inflammatory and barrier protective effects via endothelial cell protein C receptor (EPCR)-dependent, protease-activated receptor-1 (PAR1)-mediated cell signaling. FVII-EPCR-PAR1 signaling also induces the release of extracellular vesicles from endothelial cells. To obtain clues on whether microRNA (miR) carried out by FVIIa-released EEVs contribute to anti-inflammatory and barrier protective effects, we analyzed miR expression in control- and FVIIa-released EEVs by deep sequencing. These data revealed that several anti-inflammatory miR expression was higher (more than 2-fold) in FVIIa-released EEVs compared to control EEVs, the most predominant being miR10a-5p. The differential expression of miR10a-5p and several other abundant miRs were validated by qRT-PCR. Subsequent in vitro and in vivo experiments showed that miR10a in FVIIa-released EEVs contribute to anti-inflammatory and barrier protective effects.
 
Overall design EEVs were isolated from control vehicle- and FVIIa-treated human umbilical vein endothelial cells (24 h treatment). Equal number of EEVs (1x109) were subjected to microRNA analysis by deep-sequencing (UT Southwestern Core Facility)
 
Contributor(s) Das K, Mohan Rao LV, Pendurthi U
Citation(s) 34469511
Submission date Aug 27, 2021
Last update date Dec 17, 2021
Contact name Chengsong Zhu
E-mail(s) chengsongzhu@gmail.com
Phone 2146455160
Organization name UT Southwestern Medical Center
Department Immunology
Lab Microarray & Immune Phenotyping Core
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (2)
GSM5543300 Control EEVs
GSM5543301 FVIIa-released EEVs
Relations
BioProject PRJNA758366
SRA SRP334460

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182925_hairpin_normalized_CPM_matrix.csv.gz 17.0 Kb (ftp)(http) CSV
GSE182925_hairpin_raw_counts_matrix.csv.gz 14.7 Kb (ftp)(http) CSV
GSE182925_mature_normalized_CPM_matrix.csv.gz 4.3 Kb (ftp)(http) CSV
GSE182925_mature_raw_counts_matrix.csv.gz 3.9 Kb (ftp)(http) CSV
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