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Series GSE18378 Query DataSets for GSE18378
Status Public on May 17, 2010
Title Gene profiling and prediction of response to anastrozole neoadjuvant treatment in breast cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptome of 17 tru-cut biopsies and 13 matched surgical samples from ER+ breast tumor patients, treated for 3 months with Anastrozole were anayzed to identify a robust expression signature predictive of response to Anastrozole neoadjuvant treatment in ER+ breast cancer patients and, at the same time, to delineate treatment effects.
 
Overall design Each specimen had been hybridized against a Human universal reference used as baseline in each array. Two replicates with dye-swap had been performed for each sample, both before (tru-cut biopsy sample) and after treatment (surgical sample).
 
Contributor(s) Singh VK, Grand MM, Ghimenti C, Scatolini M, Regolo L, Grosso E, Zambelli A, Da Prada GA, Villani L, Baiardi P, Marsoni S, Costa A, Chiorino G
Citation(s) 20428938
Submission date Oct 02, 2009
Last update date Jan 23, 2019
Contact name vijay kumar singh
E-mail(s) vijaybioinfo@gmail.com
Organization name Fondazione "Edo ed Elvo Tempia Valenta"
Lab Cancer Genomics Laboratory
Street address via Malta 3
City Biella
State/province Biella
ZIP/Postal code 13900
Country Italy
 
Platforms (2)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
GPL6848 Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Probe Name version)
Samples (60)
GSM458463 Surgical sample 10010 Dye swap
GSM458464 Surgical sample 10010 Normal
GSM458465 Tru-cut sample 10010 Dye swap
Relations
BioProject PRJNA118149

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18378_RAW.tar 951.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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