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Series GSE184649 Query DataSets for GSE184649
Status Public on Sep 27, 2021
Title Calycosin as a novel PI3K activator reduces inflammation and fibrosis in heart failure through AKT-IKK/STAT3 axis
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Aim: Inflammation and fibrosis have been shown to be critical factors in heart failure (HF) progression. Calycosin (Cal) is the major active component of Radix astragali and has been widely used to treat inflammation in clinical practice. However, whether Cal could ameliorate myocardial infarction (MI)-induced inflammation and fibrosis and precise mechanisms remain uncertain. The aim of this study is to explore the role of Cal in HF and to clarify the underlying mechanisms.
Methods: For in vivo experiments, rats underwent left anterior descending (LAD) artery ligation for HF model, and the cardioprotective effects of Cal were measured by echocardiographic assessment and histological examination. RNA-seq approach was applied to explore potential differential genes and pathways. For further mechanistic study, pro-inflammatory conditioned media (CM)-induced H9C2 cells injury model and TGFβ-stimulated cardiac fibroblasts model were applied to determine the regulatory mechanisms of Cal.
Results: In vivo experiment, echocardiography results showed that Cal significantly improved heart function. GO and Reactome enrichment revealed that inflammation and fibrosis pathway are involved in Cal-treated group. KEGG enrichment indicated that PI3K-AKT pathway is enriched in the Cal-treated group. Further experiments proved that Cal alleviated cardiomyocyte inflammatory responses evidenced by down-regulating the expressions of phosphorylated IκB kinase α/β (p-IKKα/β), phosphorylated nuclear factor kapa B (p-NFκB) and tumor necrosis factor α (TNFα). Besides, Cal effectively attenuated cardiac fibrosis through the inhibitions of expressions and depositions of collagen I and collagen III. In vitro experiments, the phosphatidylinositol 3 kinase (PI3K) inhibitor LY294002 could abrogate the anti-inflammation and anti-fibrosis therapeutic effects of Cal, demonstrating that the cardio-protective effects of Cal were mediated through upregulations of PI3K and serine/threonine kinase (AKT).
Conclusion: Cal improves cardiac function against HF by inhibiting cardiomyocytes inflammation and fibroblasts fibrosis via activation of the PI3K-AKT pathway.
 
Overall design Cardiac mRNA profiles of control rats, HF rats and Cal-treated rats
 
Contributor(s) Wang X, Li W, Zhang Q, Wang Y
Citation(s) 35264961
Submission date Sep 23, 2021
Last update date Mar 15, 2022
Contact name Xiaoping Wang
E-mail(s) XiaopingWang726@outlook.com
Phone +8617702206558
Organization name Beijing University of Chinese Medicine
Street address No. 11, North 3rd Ring East Road, Chaoyang District, Beijing
City Beijing
State/province Beijing
ZIP/Postal code 100029
Country China
 
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (9)
GSM5594405 Control1_1
GSM5594406 Control1_2
GSM5594407 Control1_3
Relations
BioProject PRJNA765588
SRA SRP338399

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184649_CalvsModel_deg_all.txt.gz 452.9 Kb (ftp)(http) TXT
GSE184649_ModelvsCon_deg_all.txt.gz 264.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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