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Series GSE18545 Query DataSets for GSE18545
Status Public on Feb 15, 2010
Title A MicroRNA Expression Signature For Cervical Cancer Prognosis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study, we have identified a microRNA-based signature for the prediction of cervical cancer survival. MicroRNAs (miRNAs) are a newly identified family of small non-coding RNAs that are extensively involved in human cancers. Using our recently established PCR-based miRNA assays, we have analyzed 102 cervical cancers and identified two miRNAs (miR-200a and miR-9) that are likely to predict patient survival. A logistic regression model was developed based on these two miRNAs and the prognostic value of the model was subsequently validated with 42 independent cervical cancers. Furthermore, functional studies were performed to characterize the effect of miRNAs in cervical cancer cells. Our results suggest that both miR-200a and miR-9 could play important regulatory roles in cervical cancer control. In particular, miR-200a is likely to affect the metastatic potential of cervical cancer cells by simultaneously suppressing the expression of multiple genes that are important to cell motility.
 
Overall design There are five arrays included in this experiment, including one negative control, one mock control, and three arrays to profile for the effects of miRNA overexpression in HeLa cells. Two miRNAs, miR-200a and miR-9 were analyzed.
 
Contributor(s) Wang X
Citation(s) 20124485
Submission date Oct 13, 2009
Last update date Aug 16, 2018
Contact name Xiaowei Wang
Organization name University of Illinois at Chicago
Street address 909 S Wolcott Ave, Rm 5137
City Chicago
State/province IL
ZIP/Postal code 60612
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (5)
GSM461701 Negative Control
GSM461702 Mock transfection (no RNA added)
GSM461703 miR-200a transfection
Relations
BioProject PRJNA121353

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18545_Microarray_Data_Raw.txt.gz 1.1 Mb (ftp)(http) TXT
GSE18545_RAW.tar 6.2 Mb (http)(custom) TAR
Processed data included within Sample table

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