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Series GSE186100 Query DataSets for GSE186100
Status Public on Oct 20, 2021
Title Lysyl hydroxylase 2 deficiency promotes filopodia formation and fibroblast migration
Organism Mus musculus
Experiment type Expression profiling by array
Summary Lysyl hydroxylase 2 (LH2) regulates the intermolecular cross-linking of collagen molecules. Accumulation of LH2-modified collagen, which is highly stable and resistant to collagenase cleavage, is one of the causes of fibrosis. In this study, we established LH2-deficient fibroblasts and first analyzed morphology of LH2-deficient fibroblasts by microscopy. LH2-deficient fibroblasts showed a dramatic increase in filopodial dynamics and cell migration, which were supported by time-lapse video microscopy and Immunocytochemistry, and gene expression profiling data. Understanding the precise role of phenotype in LH2-deficient cells may be helpful to define the pathogenesis of fibrosis.
 
Overall design Data shows the comparison of differentially expressed genes in LH2 cKO TTFs in culture medium with tamoxifen (LH2 cKO_no.1) vs. LH2 cKO TTFs in culture medium without tamoxifen (LH2 cKO_no.2) after 24h tamoxifen treatent.
 
Contributor(s) Nozaki R, Kasamatsu A, Moss J, Uzawa K
Citation(s) 34875533
Submission date Oct 19, 2021
Last update date Jan 20, 2022
Contact name Ryunosuke Nozaki
E-mail(s) nozaki.r@chiba-u.jp
Organization name Graduate School of Medecine, Chiba university
Department Depertment of Oral science
Street address 1-8-1 Inohana, Chuo-ku, Chiba, Japan
City Chiba City
State/province Chiba Prefecture
ZIP/Postal code 260-8670
Country Japan
 
Platforms (1)
GPL21163 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray [Probe Name version]
Samples (6)
GSM5631847 control_1
GSM5631848 control_2
GSM5631849 LH2 cKO_no.1_1
Relations
BioProject PRJNA772615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186100_RAW.tar 29.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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