NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE18667 Query DataSets for GSE18667
Status Public on Sep 10, 2010
Title Study of the effect of C2 on the transcriptome and the response to MeJA
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary affy_meja_arabidopsis - We want to determine if the presence of C2 modifies the cell transcriptome and its response to methyl jasmonate. Comparison of control lines and transgenic lines expressing C2 in basal conditions and after treatment with 50uM MeJA for 10 hours. C2 lines are expressing geminivirus C2 under a 35S promoter. PR1-LUC have a luciferase transgene under the control of the promoter of PR1; since the plants are not induced, these are the control plants (resistant to kanamycin, but not expressing anything else)

Keywords: gene knock in (transgenic),treated vs untreated comparison
 
Overall design 12 arrays - ATH1
Web link http://urgv.evry.inra.fr/CATdb
 
Contributor(s) Balzergue S, Bejarano E, Lozano durán R, Martin-Magniette ML
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 21, 2009
Last update date Jun 12, 2017
Contact name sandrine balzergue
Organization name INRA
Lab IRHS
Street address Rue G. Morel
City Beaucouze
ZIP/Postal code 49000
Country France
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM463691 C2TSC_1
GSM463692 LUC2C_3
GSM463693 LUC2T_1
Relations
BioProject PRJNA121535

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18667_RAW.tar 20.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap