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| Status |
Public on May 21, 2010 |
| Title |
Effects of retinoids on estrogen-receptor-positive and -negative breast carcinoma cells: mRNA and miRNA profiling |
| Platform organisms |
Arabidopsis thaliana; Saccharomyces cerevisiae; Caenorhabditis elegans; Drosophila melanogaster; Gallus gallus; Macaca mulatta; Homo sapiens; Bos taurus; Mus musculus; Rattus norvegicus |
| Sample organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Non-coding RNA profiling by array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
21131358 |
| Submission date |
Oct 22, 2009 |
| Last update date |
Feb 22, 2018 |
| Contact name |
Maddalena Fratelli |
| E-mail(s) |
maddalena@marionegri.it
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| Phone |
+390239014217
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| Organization name |
"Mario Negri" Institute
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| Lab |
Molecular Biology
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| Street address |
Via La Masa, 19
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| City |
Milano |
| ZIP/Postal code |
I20156 |
| Country |
Italy |
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| Platforms (2) |
| GPL4133 |
Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) |
| GPL9472 |
Adelaide microarray facility Exiqon LNA miRNA microarray_version8.1 |
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| Samples (32)
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| GSM458610 |
MCF7 cells, retinoic acid effect, time 48h, repl1 |
| GSM458611 |
MCF7 cells, retinoic acid effect, time 48h, repl2 |
| GSM458612 |
MCF7 cells, retinoic acid effect, time 6h, repl1 |
| GSM458613 |
MCF7 cells, retinoic acid effect, time 6h, repl2 |
| GSM458614 |
MDA-MB-231 cells, retinoic acid effect, time 48h, repl1 |
| GSM458615 |
MDA-MB-231 cells, retinoic acid effect, time 48h, repl2 |
| GSM458616 |
MDA-MB-231 cells, retinoic acid effect, time 6h, repl1 |
| GSM458617 |
MDA-MB-231 cells, retinoic acid effect, time 6h, repl2 |
| GSM462975 |
time |
| GSM462976 |
RA |
| GSM462977 |
- RA |
| GSM462978 |
- time |
| GSM462979 |
time + RA.time |
| GSM462980 |
RA + RA.time |
| GSM462981 |
- RA - RA.time |
| GSM462982 |
- time - RA.time |
| GSM462983 |
- time - cells.time |
| GSM462984 |
- time - RA.time - cells.time - RA.cells.time |
| GSM462985 |
time + RA.time + cells.time + RA.cells.time |
| GSM462986 |
time + cells.time |
| GSM462987 |
- RA - RA.cells |
| GSM462988 |
- RA - RA.time - RA.cells - RA.cells.time |
| GSM462989 |
RA + RA.time + RA.cells + RA.cells.time |
| GSM462990 |
RA + RA.cells |
| GSM462991 |
cells + RA.cells + cells.time + RA.cells.time |
| GSM462992 |
cells + cells.time |
| GSM462993 |
- cells - cells.time |
| GSM462994 |
- cells - RA.cells - cells.time - RA.cells.time |
| GSM462995 |
- cells |
| GSM462996 |
- cells - RA.cells |
| GSM462997 |
cells + RA.cells |
| GSM462998 |
cells |
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| This SuperSeries is composed of the following SubSeries: |
| GSE18390 |
Effects of retinoids on estrogen-receptor-positive and -negative breast carcinoma cells: mRNA profiling |
| GSE18628 |
MicroRNA profiling shows different response to retinoids in estrogen-receptor positive and negative cells |
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| Relations |
| BioProject |
PRJNA121479 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE18693_RAW.tar |
118.6 Mb |
(http)(custom) |
TAR (of SPOT, TXT) |
| Raw data provided as supplementary file |
| Processed data included within Sample table |
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