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Series GSE18794 Query DataSets for GSE18794
Status Public on Feb 17, 2015
Title Mycobacterium tuberculosis Chaperonin 60.1 has Bipolar Effects on Human peripheral blood-derived Monocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Chaperonin 60 (Cpn60) is a prototypic molecular chaperone essential for cellular function due to its protein folding actions. However, over the past decade it has been established that Cpn60 can be released by human cells and by certain bacteria to act as an extracellular signalling protein. Mycobacterium tuberculosis produces two Cpn60 proteins: Cpn60.1 and Cpn60.2. We recently generated a M. tuberculosis mutant with an inactivated cpn60.1 gene and demonstrated that granuloma formation was impaired after murine/guinea pig infection. This finding suggested that Cpn60.1 may interact with the cellular organisation of the host response to M. tuberculosis bacilli. In this study, we report that recombinant M. tuberculosis Cpn60.1 has both pro- and anti-inflammatory effects on human circulating monocytes. At high concentrations, recombinant Cpn60.1 induces the synthesis of TNF-α, IL6, and IL8, and promotes the phosphorylation of NF-κBp65, p44/42MAPK and p38 MAPK. At lower concentrations M. tuberculosis Cpn60.1 inhibits lipopolysaccharide-induced release of TNF-α, and monocyte transcriptional activation program. Both effects are abrogated by proteolysis of Cpn60.1 and therefore cannot be attributed to contamination with lipopolysaccharide. Competition with LPS for binding to a common receptor, the release of IL-10 or down-regulation of TLR4 on the cell surface were excluded as explanations for the inhibitory activity of Cpn60.1. We therefore conclude that M. tuberculosis Cpn60.1 is an unusual protein with the ability to induce bipolar effects on human monocytes, which may help explain the pathology of granuloma formation in tuberculosis.
We used microarrays to analyse the bipolar effectsof Cpn60.1 on human monocytes.
 
Overall design To study the pro-inflammatory activities of Cpn60.1, human monocytes were purified from three healthy donors and incubated with 10 μg/ml M. tuberculosis Cpn60.1 (or 100 ng/ml LPS as a positive control or medium only as a negative control). To study the inhibitory effectds of Cpn60.1 on human monocytes, the cells were pre-exposed to 10μg/ml or 0.1ng/ml of Cpn60.1, washed and incubated with 1ng/ml LPS for further 2 hours. For positive control, the cells were pre-exposed to medium before washing and LPS stimulation while for the negative control, the cells were pre-exposed to medium, washed and again exposed to medium alone.
 
Contributor(s) Cehovin A, Henderson B, Coates AR, Waddell SJ
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 29, 2009
Last update date Jul 26, 2018
Contact name Ana Cehovin
E-mail(s) a.cehovin@imperial.ac.uk
Phone 02075943094
Fax 02075943095
Organization name Imperial College London
Department Centre for Molecular Microbiology and Infection
Lab Pelicic Lab
Street address Exhibition Road
City London
State/province United Kingdom
ZIP/Postal code SW7 2AZ
Country United Kingdom
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (21)
GSM466274 HuMonocytes_LPS_2hr_rep1
GSM466275 HuMonocytes_LPS_2hr_rep2
GSM466276 HuMonocytes_LPS_2hr_rep3
Relations
BioProject PRJNA121199

Comparison header descriptions
ID_REF
Comparison Medium - Mtb Cpn60.1log2 fold change
Comparison Medium - Mtb Cpn60.1 Adjusted P-VALUE
Comparison Medium - LPS log2 fold change
Comparison Medium - LPS Adjusted P-VALUE
Comparison Medium INH - MtbCpn60.1 0.1 LPS log2 fold change
Comparison Medium INH - MtbCpn60.1 0.1 LPS Adjusted P-VALUE
Comparison Medium INH - MtbCpn60.1 10 LPS log2 fold change
Comparison Medium INH - MtbCpn60.1 10 LPS Adjusted P-VALUE
Comparison Medium INH - LPS INH log2 fold change
Comparison Medium INH -LPS INH Adjusted P-VALUE

Data table
ID_REF Comparison Medium - Mtb Cpn60.1log2 fold change Comparison Medium - Mtb Cpn60.1 Adjusted P-VALUE Comparison Medium - LPS log2 fold change Comparison Medium - LPS Adjusted P-VALUE Comparison Medium INH - MtbCpn60.1 0.1 LPS log2 fold change Comparison Medium INH - MtbCpn60.1 0.1 LPS Adjusted P-VALUE Comparison Medium INH - MtbCpn60.1 10 LPS log2 fold change Comparison Medium INH - MtbCpn60.1 10 LPS Adjusted P-VALUE Comparison Medium INH - LPS INH log2 fold change Comparison Medium INH -LPS INH Adjusted P-VALUE
7896740
7896742 -0.25 0.90317616 0.116666667 0.840603238 0.223333333 0.939639881 -1.26 0.013187762 0.206666667 0.769064141
7896744
7896756 0.096666667 0.886540156 0.04 0.833310975 0.223333333 0.84033862 -0.146666667 0.360070336 0.136666667 0.501010052
7896759 0.156666667 0.866934421 -0.01 0.972038311 -0.133333333 0.915238303 0.05 0.840773655 -0.036666667 0.914072516
7896761 -0.016666667 0.984289564 -0.28 0.06932178 0.12 0.881433738 -0.406666667 0.009697556 -0.27 0.124053223
7896779 0.033333333 0.970914121 -0.13 0.441113716 0.136666667 0.874917224 -0.356666667 0.027472217 -0.333333333 0.06683275
7896798 -0.06 0.917131947 -0.003333333 0.984710856 -0.043333333 0.96105084 -0.11 0.400982884 0.033333333 0.866421635
7896817 0.023333333 0.990379213 -1.573333333 1.23608E-05 0.12 0.949090955 -0.303333333 0.301758829 -1.026666667 0.003146003
7896822 -0.13 0.79814824 -0.273333333 0.06409411 0.026666667 0.975802059 -0.263333333 0.068200436 -0.306666667 0.063651599
7896865 0.056666667 0.947782971 -0.1 0.58356226 0.193333333 0.84047562 0.01 0.959944042 -0.023333333 0.926663801
7896878 -0.106666667 0.88479038 -0.336666667 0.056434332 0.023333333 0.985054836 0.273333333 0.110906142 -0.336666667 0.091452606
7896882 -0.113333333 0.886591272 -0.286666667 0.140327268 0.116666667 0.910447579 -0.236666667 0.206932222 -0.13 0.603655804
7896908 0.016666667 0.983174139 -0.036666667 0.828136886 -0.006666667 0.993714938 0.05 0.744980604 0.186666667 0.275318881
7896917 0.1 0.853558675 0.253333333 0.066865933 -0.08 0.915553705 -0.143333333 0.286217365 0.09 0.617617618
7896921 -0.073333333 0.927995066 -0.08 0.682404429 0.01 0.992313503 -0.376666667 0.034105013 -0.196666667 0.355257076
7896929 -0.036666667 0.966302534 -0.146666667 0.367680992 0.126666667 0.880092477 -0.4 0.012680626 -0.176666667 0.347335395
7896937 -0.103333333 0.891543877 -0.19 0.314081083 -0.123333333 0.898007938 -0.093333333 0.622211735 -0.206666667 0.346601858
7896952 0.003333333 0.995161139 -0.2 0.254619675 0.05 0.962840548 0.043333333 0.815062364 -0.04 0.877276015
7896961 -0.05 0.961788899 -0.066666667 0.762376491 -0.03 0.980149496 0.223333333 0.23867101 -0.133333333 0.596201501

Total number of rows: 25001

Table truncated, full table size 2310 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18794_RAW.tar 81.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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