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Series GSE189338 Query DataSets for GSE189338
Status Public on Nov 30, 2021
Title Expression profile of circRNA in peripheral blood mononuclear cells of patients with rheumatoid arthritis
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary In order to identify new biomarkers for the diagnosis of rheumatoid arthritis, we used circRNA microarray technology to screen the differential expression of circRNA in peripheral blood mononuclear cells of patients with rheumatoid arthritis. We identified a total of 399 differentially expressed circRNAs in RA patients and healthy controls, of which 149 circRNAs were significantly up-regulated in RA patients and 250 were down-regulated. Among them, hsa_circRNA_101328 may be a potential biomarker for the diagnosis of RA.
 
Overall design We performed microarray analysis on the circRNAs expression profiles in PBMCs of 4 RA patients and 4 healthy controls.Real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) was used to verify the differential expression of circRNAs in PBMCs of 20 RA patients,10 systemic lupus erythematosus (SLE) patients and 20 age- and gender-matched controls.
 
Contributor(s) Yang J, Lu H, Yang Y, Kuang D, Liu P
Citation(s) 35379246
Submission date Nov 22, 2021
Last update date Apr 19, 2022
Contact name Junping Yang
E-mail(s) 20086061@jxutcm.edu.cn
Phone 18379973277
Organization name Jiangxi Chinese Medical University
Department Laboratory
Lab Laboratory
Street address 56 Yangming Road, Donghu District
City Nanchang
State/province Jiangxi
ZIP/Postal code 330006
Country China
 
Platforms (1)
GPL21825 074301 Arraystar Human CircRNA microarray V2
Samples (8)
GSM5699428 ExVivoBlood-rheumatoid arthritis1
GSM5699429 ExVivoBlood-rheumatoid arthritis2
GSM5699430 ExVivoBlood-rheumatoid arthritis3
Relations
BioProject PRJNA782610

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189338_RAW.tar 5.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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